Pairwise Alignments

Query, 542 a.a., peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 536 a.a., putative ABC transporter ATP-binding protein YejF from Pseudomonas sp. DMC3

 Score =  399 bits (1026), Expect = e-115
 Identities = 217/530 (40%), Positives = 332/530 (62%), Gaps = 11/530 (2%)

Query: 1   MTMDKLLTVCGLSLEVA--RTGQQVVKSVSFDLAPGEIFGIVGESGSGKTLATRALISLL 58
           M  D L+ V  L++E        +VV+ VSFD+  GE   +VGESGSGK++   +++ LL
Sbjct: 1   MNQDNLIEVRDLAVEFGFGERVHRVVEGVSFDIKRGETLALVGESGSGKSVTAHSILRLL 60

Query: 59  P-PTIKVADGSVSYKGRDVLKMKENELRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGL 117
           P P  +   GS++Y G+++L + E  +RH+RG  I ++FQEPMTSLNP  +I +Q+ E L
Sbjct: 61  PYPMARHPAGSINYAGQNLLDLSEKTIRHIRGNRIAMIFQEPMTSLNPLHSIEKQINEVL 120

Query: 118 ILHTKASAQERRSLILDMLKRVGIRDPEGALSSYPHEFSGGMRQRIMLASVMLLKPALLI 177
            +H   S +      L++L+ VGI +P   L + PHE SGG RQR+M+A  +  +P LLI
Sbjct: 121 GIHKGLSGKVATKRTLELLEMVGIPEPHKRLKALPHELSGGQRQRVMIAMALANEPELLI 180

Query: 178 ADEPTTALDAVIQRDVMELMVELTRAEGTAILLISHDLPMVARYTSRIVVMEKGAIVEKG 237
           ADEPTTALD  +Q  +++L+ +L    G ++LLISHDL +V R   R+ VM++G IVE+ 
Sbjct: 181 ADEPTTALDVTVQLKILDLLKDLQARLGMSLLLISHDLNLVRRIAHRVCVMQRGCIVEQA 240

Query: 238 RTEDLLKAPQHPYTKKLLSSLPFRGRPRQIDLTSVPMISARDIIVDYAGRKSLFRKNKP- 296
              +L ++PQHPYT++LL + P  G P   ++   P++   D+ V +  +K L ++    
Sbjct: 241 SCAELFRSPQHPYTRELLGAEP-SGGPASNEI-GAPLLEVEDLKVWFPIKKGLLKRTVDY 298

Query: 297 KRALHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAGLVTESEGRIQFQGRP----RTENW 352
            +A+ G++  + +G+ + +VG SGSGK+TLG  I  L+  S+G I+F+G+          
Sbjct: 299 VKAVDGINFSLPQGQTLGIVGESGSGKSTLGLAILRLI-GSKGAIRFEGKQLDCLTQSEV 357

Query: 353 TDYRLNCQMVFQDPYSSLDPRMTIEALVEEALRPVPGLDGKAKRKRTLETLEEVGLGVDY 412
              R   Q+VFQDP+ SL PRM +  +V E LR         +    +  L+EVGL  + 
Sbjct: 358 RPLRREMQVVFQDPFGSLSPRMCVNDIVGEGLRIHKMGTAAEQEAAIIAALKEVGLDPET 417

Query: 413 AGRYPHELSGGQRQRVAIARAIARRPRFLIADEPVSALDVTVRAQVLDLFSDLQKRYGFS 472
             RYPHE SGGQRQR+AIARA+  +P  ++ DEP SALD TV+ QV++L   LQ +Y  +
Sbjct: 418 RHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRSLQAKYNLT 477

Query: 473 CLFISHDLGVVEQVADRVVVMQDGRIIEEGDRDTIFDSPKEAYTRRLLSA 522
            LFISHDL VV+ ++ +++V++ G+++E+GD  +IF +P+  YT++LL A
Sbjct: 478 YLFISHDLAVVKALSHQLMVVKHGQVVEQGDAQSIFAAPQHPYTQQLLEA 527



 Score =  184 bits (466), Expect = 1e-50
 Identities = 116/264 (43%), Positives = 151/264 (57%), Gaps = 18/264 (6%)

Query: 274 MISARDIIVDYAGRKSLFRKNKPKRALHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAGL 333
           +I  RD+ V++   + + R       + GVS DI  GE +ALVG SGSGK+    +I  L
Sbjct: 6   LIEVRDLAVEFGFGERVHR------VVEGVSFDIKRGETLALVGESGSGKSVTAHSILRL 59

Query: 334 VT-----ESEGRIQFQGRPRTE----NWTDYRLN-CQMVFQDPYSSLDPRMTIEALVEEA 383
           +         G I + G+   +         R N   M+FQ+P +SL+P  +IE  + E 
Sbjct: 60  LPYPMARHPAGSINYAGQNLLDLSEKTIRHIRGNRIAMIFQEPMTSLNPLHSIEKQINEV 119

Query: 384 LRPVPGLDGKAKRKRTLETLEEVGLGVDYAG--RYPHELSGGQRQRVAIARAIARRPRFL 441
           L    GL GK   KRTLE LE VG+   +      PHELSGGQRQRV IA A+A  P  L
Sbjct: 120 LGIHKGLSGKVATKRTLELLEMVGIPEPHKRLKALPHELSGGQRQRVMIAMALANEPELL 179

Query: 442 IADEPVSALDVTVRAQVLDLFSDLQKRYGFSCLFISHDLGVVEQVADRVVVMQDGRIIEE 501
           IADEP +ALDVTV+ ++LDL  DLQ R G S L ISHDL +V ++A RV VMQ G I+E+
Sbjct: 180 IADEPTTALDVTVQLKILDLLKDLQARLGMSLLLISHDLNLVRRIAHRVCVMQRGCIVEQ 239

Query: 502 GDRDTIFDSPKEAYTRRLLSAIPA 525
                +F SP+  YTR LL A P+
Sbjct: 240 ASCAELFRSPQHPYTRELLGAEPS 263