Pairwise Alignments

Query, 542 a.a., peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 629 a.a., dipeptide ABC transporter ATP-binding protein from Paraburkholderia sabiae LMG 24235

 Score =  395 bits (1015), Expect = e-114
 Identities = 222/542 (40%), Positives = 328/542 (60%), Gaps = 38/542 (7%)

Query: 24  VKSVSFDLAPGEIFGIVGESGSGKTLATRALISLLPPTI-KVADGSVSYKGR-----DVL 77
           V+ +S  +  GE   IVGESGSGK++ + AL+ L+     K+A+GS++++ R     D++
Sbjct: 39  VRDLSLTVDRGETLAIVGESGSGKSVTSLALMRLVEHGGGKIANGSIAFRRRNGSVLDLV 98

Query: 78  KMKENELRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGLILHTKASAQERRSLILDMLK 137
           +  +  +R +RGA+I ++FQEPMTSLNP  T+G Q+ E + LH   S  E  +  L +L 
Sbjct: 99  QASQATMRSVRGADIAMIFQEPMTSLNPVFTVGDQIGEAIALHQNKSRSEAHAETLRLLD 158

Query: 138 RVGIRDPEGALSSYPHEFSGGMRQRIMLASVMLLKPALLIADEPTTALDAVIQRDVMELM 197
            V I +     + YPH+ SGGMRQR+M+A  +  KP+LLIADEPTTALD  IQ  +++L+
Sbjct: 159 LVRIPEARRVAARYPHQLSGGMRQRVMIAMALSCKPSLLIADEPTTALDVTIQAQILQLI 218

Query: 198 VELTRAEGTAILLISHDLPMVARYTSRIVVMEKGAIVEKGRTEDLLKAPQHPYTKKLLSS 257
             L       ++ I+HD+ +VA    R++VM +G  VE+G +  L  AP HPYTK LL++
Sbjct: 219 RGLQDEMNMGVIFITHDMGVVAEVADRVLVMYRGDKVEEGESAQLFAAPAHPYTKALLAA 278

Query: 258 LPFRGR------PRQIDLTSV---------------------PMISARDIIVDYAGRKSL 290
           +P  G       P +  L ++                     P++  RD++  +  R  L
Sbjct: 279 VPKLGSMQGTDAPAKFSLLTLDGEQAKAAPEAQAQTQTQAAQPVLRVRDLVTRFPVRSGL 338

Query: 291 FRKNKPK-RALHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAGLVTESEGRIQFQGRPRT 349
           F K   +  A+  VS D+H GE +ALVG SG GK+T GR++  LV    G I+F G+  +
Sbjct: 339 FSKLTGRVHAVERVSFDLHAGETLALVGESGCGKSTTGRSLLRLVESQSGSIEFDGKDIS 398

Query: 350 E----NWTDYRLNCQMVFQDPYSSLDPRMTIEALVEEALRPVPGLDGKAKRKRTLETLEE 405
                +    R + Q +FQDP++SL+PR+T+   + E L       GK  + R    L++
Sbjct: 399 SLSGPSLQALRRDIQFIFQDPFASLNPRLTVGFSIMEPLLVHNVASGKEAQARVAWLLDK 458

Query: 406 VGLGVDYAGRYPHELSGGQRQRVAIARAIARRPRFLIADEPVSALDVTVRAQVLDLFSDL 465
           VGL  D A RYPHE SGGQRQR+AIARA+A  P+ +IADE VSALDV+V+AQ+++L  DL
Sbjct: 459 VGLPADAARRYPHEFSGGQRQRIAIARALALNPKVVIADESVSALDVSVQAQIVNLMLDL 518

Query: 466 QKRYGFSCLFISHDLGVVEQVADRVVVMQDGRIIEEGDRDTIFDSPKEAYTRRLLSAIPA 525
           Q+  G + LFISHD+ VVE+++ RV VM  G+I+E G R  +F+SP+  YT++L+ A+P 
Sbjct: 519 QRELGVAYLFISHDMAVVERISHRVAVMYLGQIVEIGPRRAVFESPQHPYTKKLMGAVPV 578

Query: 526 LD 527
            D
Sbjct: 579 AD 580



 Score =  157 bits (398), Expect = 9e-43
 Identities = 101/278 (36%), Positives = 145/278 (52%), Gaps = 18/278 (6%)

Query: 281 IVDYAGRKSLFRKNKPK-RALHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAGLVTESEG 339
           +VD       FR+ +    A+  +S+ +  GE +A+VG SGSGK+     +  LV    G
Sbjct: 19  VVDIDSMTVAFRRGETTFNAVRDLSLTVDRGETLAIVGESGSGKSVTSLALMRLVEHGGG 78

Query: 340 RI---QFQGRPRTENWTDYRLNCQ------------MVFQDPYSSLDPRMTIEALVEEAL 384
           +I       R R  +  D     Q            M+FQ+P +SL+P  T+   + EA+
Sbjct: 79  KIANGSIAFRRRNGSVLDLVQASQATMRSVRGADIAMIFQEPMTSLNPVFTVGDQIGEAI 138

Query: 385 RPVPGLDGKAKRKRTLETLEEVGL--GVDYAGRYPHELSGGQRQRVAIARAIARRPRFLI 442
                         TL  L+ V +      A RYPH+LSGG RQRV IA A++ +P  LI
Sbjct: 139 ALHQNKSRSEAHAETLRLLDLVRIPEARRVAARYPHQLSGGMRQRVMIAMALSCKPSLLI 198

Query: 443 ADEPVSALDVTVRAQVLDLFSDLQKRYGFSCLFISHDLGVVEQVADRVVVMQDGRIIEEG 502
           ADEP +ALDVT++AQ+L L   LQ       +FI+HD+GVV +VADRV+VM  G  +EEG
Sbjct: 199 ADEPTTALDVTIQAQILQLIRGLQDEMNMGVIFITHDMGVVAEVADRVLVMYRGDKVEEG 258

Query: 503 DRDTIFDSPKEAYTRRLLSAIPALDQNEKGGVTLKWRL 540
           +   +F +P   YT+ LL+A+P L   +      K+ L
Sbjct: 259 ESAQLFAAPAHPYTKALLAAVPKLGSMQGTDAPAKFSL 296