Pairwise Alignments

Query, 542 a.a., peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 530 a.a., microcin C ABC transporter ATP-binding protein YejF from Serratia liquefaciens MT49

 Score =  383 bits (984), Expect = e-111
 Identities = 211/516 (40%), Positives = 310/516 (60%), Gaps = 8/516 (1%)

Query: 11  GLSLEVARTGQQVVKSVSFDLAPGEIFGIVGESGSGKTLATRALISLLP-PTIKVADGSV 69
           G++         VV  +S  +   E   +VGESGSGK++   +++ LLP P +    G +
Sbjct: 13  GVAFRQGEVLNPVVNGLSLQIEKAETLALVGESGSGKSVTALSVLRLLPSPPVVYTAGDI 72

Query: 70  SYKGRDVLKMKENELRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGLILHTKASAQERR 129
            + G  +L   E ELR +RG +I ++FQEPM SLNP  TI +QL E L LH        R
Sbjct: 73  QFNGNSLLHAPEGELRKVRGNQISMIFQEPMVSLNPLHTIEKQLAEVLALHRGMRRDVAR 132

Query: 130 SLILDMLKRVGIRDPEGALSSYPHEFSGGMRQRIMLASVMLLKPALLIADEPTTALDAVI 189
             I+  L RVGIR+ +G L  YPH+ SGG RQR+M+A  +L +P LLIADEPTTALD  I
Sbjct: 133 GEIIQCLDRVGIRNAKGRLKDYPHQLSGGERQRVMIAMAVLTQPKLLIADEPTTALDVTI 192

Query: 190 QRDVMELMVELTRAEGTAILLISHDLPMVARYTSRIVVMEKGAIVEKGRTEDLLKAPQHP 249
           Q  ++ L+ EL +  G  +L I+H+L +V R    + VM +G  VE+     L   P HP
Sbjct: 193 QAQILLLLKELKQEMGMGLLFITHNLNIVRRLADNVAVMRQGQCVEQNDRVRLFSQPLHP 252

Query: 250 YTKKLLSSLPFRGRPRQIDLTSVPMISARDIIVDYAGRKSLFRKNKPKR-ALHGVSIDIH 308
           YT++LL++    G P  +   + P++   ++ V +  ++ L R+      AL  +S ++ 
Sbjct: 253 YTQQLLAAENV-GDPLPLPADAAPLLKVENLQVSFPIKRGLLRRTVGHHYALKDLSFELK 311

Query: 309 EGEVVALVGGSGSGKTTLGRTIAGLVTESEGRIQFQGRP----RTENWTDYRLNCQMVFQ 364
            GE V LVG SGSGK+T G  +  L++ ++G + F G+P      +    YR   Q+VFQ
Sbjct: 312 AGESVGLVGESGSGKSTTGLALLRLLS-AKGAMWFNGQPLHQFSMKQMLPYRSQMQIVFQ 370

Query: 365 DPYSSLDPRMTIEALVEEALRPVPGLDGKAKRKRTLETLEEVGLGVDYAGRYPHELSGGQ 424
           DP+S+L+PR+ +  ++ E L     L  + + +R +E L+EVGL      RYP E SGGQ
Sbjct: 371 DPFSALNPRLNVLQIIAEGLEVHQKLSAEQREQRVIEVLQEVGLDPALRHRYPTEFSGGQ 430

Query: 425 RQRVAIARAIARRPRFLIADEPVSALDVTVRAQVLDLFSDLQKRYGFSCLFISHDLGVVE 484
           RQR+AIARA+  +P+ LI DEP S+LD +V+AQ+L L   LQ+R+  + LFISHDL VV 
Sbjct: 431 RQRIAIARALILQPQLLILDEPTSSLDKSVQAQILTLLKSLQQRHRLAYLFISHDLQVVR 490

Query: 485 QVADRVVVMQDGRIIEEGDRDTIFDSPKEAYTRRLL 520
            +  +V+V++ G ++E+GD  TIF+SP  AYT++LL
Sbjct: 491 SLCHQVIVLRQGEVVEQGDCQTIFNSPAAAYTQQLL 526



 Score =  164 bits (415), Expect = 8e-45
 Identities = 101/267 (37%), Positives = 153/267 (57%), Gaps = 20/267 (7%)

Query: 269 LTSVPMISARDIIVDYAGRKSLFRKNKPKRALHGVSIDIHEGEVVALVGGSGSGKTTLGR 328
           + S P++S +D+ V +   + L         ++G+S+ I + E +ALVG SGSGK+    
Sbjct: 1   MASTPLLSIQDLGVAFRQGEVL------NPVVNGLSLQIEKAETLALVGESGSGKSVTAL 54

Query: 329 TIAGL-----VTESEGRIQFQGR-----PRTENWTDYRLNCQMVFQDPYSSLDPRMTIEA 378
           ++  L     V  + G IQF G      P  E          M+FQ+P  SL+P  TIE 
Sbjct: 55  SVLRLLPSPPVVYTAGDIQFNGNSLLHAPEGELRKVRGNQISMIFQEPMVSLNPLHTIEK 114

Query: 379 LVEEALRPVPGLDGKAKRKRTLETLEEVGLGVDYAGR---YPHELSGGQRQRVAIARAIA 435
            + E L    G+     R   ++ L+ VG+  +  GR   YPH+LSGG+RQRV IA A+ 
Sbjct: 115 QLAEVLALHRGMRRDVARGEIIQCLDRVGIR-NAKGRLKDYPHQLSGGERQRVMIAMAVL 173

Query: 436 RRPRFLIADEPVSALDVTVRAQVLDLFSDLQKRYGFSCLFISHDLGVVEQVADRVVVMQD 495
            +P+ LIADEP +ALDVT++AQ+L L  +L++  G   LFI+H+L +V ++AD V VM+ 
Sbjct: 174 TQPKLLIADEPTTALDVTIQAQILLLLKELKQEMGMGLLFITHNLNIVRRLADNVAVMRQ 233

Query: 496 GRIIEEGDRDTIFDSPKEAYTRRLLSA 522
           G+ +E+ DR  +F  P   YT++LL+A
Sbjct: 234 GQCVEQNDRVRLFSQPLHPYTQQLLAA 260