Pairwise Alignments

Query, 542 a.a., peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 623 a.a., Dipeptide transport ATP-binding protein DppD in protein degradation cluster from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  409 bits (1051), Expect = e-118
 Identities = 234/561 (41%), Positives = 339/561 (60%), Gaps = 40/561 (7%)

Query: 6   LLTVCGLSLEVARTGQQV--VKSVSFDLAPGEIFGIVGESGSGKTLATRALISLLPPT-- 61
           +L+V GL++     GQQV  V++VS  L  GE   IVGESGSGK++   AL+ L+  +  
Sbjct: 12  VLSVSGLNIAFHHEGQQVDAVRNVSLRLKRGETLAIVGESGSGKSVTALALMRLIEQSGA 71

Query: 62  -IKVADGSVSYKGRDVLKMKEN---ELRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGL 117
            ++  +  +  + R V+++ E    ++R +RGA+I ++FQEPMTSLNP  T+G Q+ E +
Sbjct: 72  NVRCGEMLLRRRNRQVIELSEQSDAQMRRVRGADIAMIFQEPMTSLNPVFTVGEQIAESI 131

Query: 118 ILHTKASAQERRSLILDMLKRVGIRDPEGALSSYPHEFSGGMRQRIMLASVMLLKPALLI 177
            LH  AS +E  +    ML +V I + +  LS YPH+ SGGMRQR+M+A  +  +PA+LI
Sbjct: 132 RLHQGASHEEALAEAKRMLDQVRIPESQAILSRYPHQLSGGMRQRVMIAMALSCRPAVLI 191

Query: 178 ADEPTTALDAVIQRDVMELMVELTRAEGTAILLISHDLPMVARYTSRIVVMEKGAIVEKG 237
           ADEPTTALD  IQ  +++L+  L +     ++ I+HD+ +VA    R++VM +G  VE G
Sbjct: 192 ADEPTTALDVTIQAQILQLIKVLQQEMSMGVIFITHDMGVVADIADRVLVMYQGEAVETG 251

Query: 238 RTEDLLKAPQHPYTKKLLSSLPFRGR------PRQIDLTSV------------------- 272
             E +  AP HPYT+ LL+++P  G       PR+  L S                    
Sbjct: 252 SVEQIFHAPTHPYTQTLLAAVPQLGAMRGHSLPRRFPLISADEPALYESQIEQDTVVEGE 311

Query: 273 PMISARDIIVDYAGRKSLF-RKNKPKRALHGVSIDIHEGEVVALVGGSGSGKTTLGRTIA 331
           P++  R ++  +  R  LF R  +   A+  +S D+  GE ++LVG SGSGK+T GR + 
Sbjct: 312 PILQVRGLVTRFPLRSGLFNRVTREVHAVENISFDLWPGETLSLVGESGSGKSTTGRALL 371

Query: 332 GLVTESEGRIQFQGRP----RTENWTDYRLNCQMVFQDPYSSLDPRMTIEALVEEALRPV 387
            LV   +G I F G+             R + Q +FQDPY+SLDPR T+   + E LR +
Sbjct: 372 RLVESRQGEIIFNGQRIDTLSAGKLQPLRRDIQCIFQDPYASLDPRQTVGYSIMEPLR-I 430

Query: 388 PGL-DGKAKRKRTLETLEEVGLGVDYAGRYPHELSGGQRQRVAIARAIARRPRFLIADEP 446
            GL  G A  KR    LE VGL  ++A RYPHE SGGQRQR+ IARA+A  P+ +IADE 
Sbjct: 431 HGLGQGDAAAKRVAWLLERVGLRPEHAWRYPHEFSGGQRQRICIARALALNPKVIIADEA 490

Query: 447 VSALDVTVRAQVLDLFSDLQKRYGFSCLFISHDLGVVEQVADRVVVMQDGRIIEEGDRDT 506
           VSALDV+VR Q+++L  DLQ+  G + LFISHD+ VVE+++ RV VM  G+I+E G R  
Sbjct: 491 VSALDVSVRGQIINLLLDLQREMGIAYLFISHDMAVVERISHRVAVMYLGQIVEMGPRRA 550

Query: 507 IFDSPKEAYTRRLLSAIPALD 527
           +F++P+  YTR+L++A+P  D
Sbjct: 551 VFENPQHPYTRKLMAAVPVAD 571