Pairwise Alignments

Query, 542 a.a., peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 615 a.a., murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF from Erwinia amylovora T8

 Score =  410 bits (1053), Expect = e-119
 Identities = 236/563 (41%), Positives = 339/563 (60%), Gaps = 42/563 (7%)

Query: 4   DKLLTVCGLSLEVARTGQ--QVVKSVSFDLAPGEIFGIVGESGSGKTLATRALISLLPPT 61
           DK+L+V  LS+  AR GQ  Q VK++S D+  GE   IVGESGSGK++ + AL+ L+   
Sbjct: 8   DKVLSVRDLSVSFAREGQHIQAVKNLSLDVHAGETLAIVGESGSGKSVTSLALMRLVEQG 67

Query: 62  IKVAD-GSVSYKGR-----DVLKMKENELRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEE 115
               D GS+ +  R     D+  + + +LR +RGA++ ++FQEPMTSLNP  ++G Q+ E
Sbjct: 68  GGTLDSGSIWFHRRQQPPVDLAILSQRQLRRIRGADMAMIFQEPMTSLNPVFSVGEQIAE 127

Query: 116 GLILHTKASAQERRSLILDMLKRVGIRDPEGALSSYPHEFSGGMRQRIMLASVMLLKPAL 175
            + LH   S  E  +    ML  V I + +  LS YPH+ SGGMRQR+M+A  +  +PAL
Sbjct: 128 SIRLHQGKSHAEALAEARRMLDLVRIPEAKNVLSRYPHQLSGGMRQRVMIAMALSCRPAL 187

Query: 176 LIADEPTTALDAVIQRDVMELMVELTRAEGTAILLISHDLPMVARYTSRIVVMEKGAIVE 235
           LIADEPTTALD  IQ  +++L+  L +     ++ I+HD+ +VA    R+ VM +G +VE
Sbjct: 188 LIADEPTTALDVTIQAQILQLIRVLQKEMQMGVIFITHDMGVVAEMADRVQVMYRGDVVE 247

Query: 236 KGRTEDLLKAPQHPYTKKLLSSLPFRGR------PRQIDLTSV----------------- 272
            G  E +   PQ PYT+ LL+++P  G       P +  LT                   
Sbjct: 248 TGSVEAIFSRPQQPYTRALLAAVPKLGSMSGRDLPAKFPLTDAVATAAEAPQDTVDRQKA 307

Query: 273 PMISARDIIVDYAGRKSLFRKNKPKRALHGV---SIDIHEGEVVALVGGSGSGKTTLGRT 329
           P++  RD++  +  R  +F  N+ KR +H V   S D+  GE +ALVG SG GK+T GR+
Sbjct: 308 PILQVRDLVTRFDIRSGIF--NRVKRRVHAVEKVSFDLRAGETLALVGESGCGKSTTGRS 365

Query: 330 IAGLVTESEGRIQFQGRPRTENWTD-----YRLNCQMVFQDPYSSLDPRMTIEALVEEAL 384
           +  LV    G I F G+ R E  +       R + Q +FQDPY+SLDPR+T+   + E L
Sbjct: 366 LLRLVANQGGSITFNGQ-RIERLSGPALSHLRRDIQFIFQDPYASLDPRLTVGYSIMEPL 424

Query: 385 RPVPGLDGKAKRKRTLETLEEVGLGVDYAGRYPHELSGGQRQRVAIARAIARRPRFLIAD 444
                  G+   +R    LE VGL  D+A RYPHE SGGQRQR+ IARA+A +P+ +IAD
Sbjct: 425 LVHGVARGQEAEQRVASLLERVGLQADHARRYPHEFSGGQRQRICIARALALKPKVVIAD 484

Query: 445 EPVSALDVTVRAQVLDLFSDLQKRYGFSCLFISHDLGVVEQVADRVVVMQDGRIIEEGDR 504
           E VSALDV+V+AQ+++L  DLQ+ +G + LFISHD+ VVE+++ RV VM  G+I+E G R
Sbjct: 485 EAVSALDVSVQAQIINLMLDLQREFGIAFLFISHDMAVVERISHRVAVMYLGQIVEIGPR 544

Query: 505 DTIFDSPKEAYTRRLLSAIPALD 527
             +F  P+  YTR+L++++P  D
Sbjct: 545 QAVFGHPQHPYTRKLMASVPVAD 567