Pairwise Alignments

Query, 542 a.a., peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 527 a.a., microcin C ABC transporter ATP-binding protein YejF from Erwinia amylovora T8

 Score =  368 bits (944), Expect = e-106
 Identities = 211/525 (40%), Positives = 311/525 (59%), Gaps = 11/525 (2%)

Query: 6   LLTVCGLSLEVARTGQQ--VVKSVSFDLAPGEIFGIVGESGSGKTLATRALISLLP-PTI 62
           LL++  LS+   + G+Q  VV  +S  +  GE   +VGESGSGK++   +++ LLP P +
Sbjct: 3   LLSIKDLSIAFLQQGEQRQVVDGLSLSVDAGETLALVGESGSGKSVTALSVMRLLPTPPV 62

Query: 63  KVADGSVSYKGRDVLKMKENELRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGLILHTK 122
               G + + G+ VL   E  LR LRG  I ++FQEPM SLNP   I +QL E L LH  
Sbjct: 63  VYPQGDILFAGQSVLHADERTLRGLRGNRIAMIFQEPMVSLNPLHNIEKQLYEVLSLHRG 122

Query: 123 ASAQERRSLILDMLKRVGIRDPEGALSSYPHEFSGGMRQRIMLASVMLLKPALLIADEPT 182
              +  R  +L  L+RVGIR     L  YPH+ SGG RQR+M+A  +L +P LLIADEPT
Sbjct: 123 MRREAARGEMLSCLERVGIRQAAKRLHDYPHQLSGGERQRVMIAMALLTQPELLIADEPT 182

Query: 183 TALDAVIQRDVMELMVELTRAEGTAILLISHDLPMVARYTSRIVVMEKGAIVEKGRTEDL 242
           TALD  +Q  ++ L+ EL +     +L I+H+L +V +    + VM  G  VE   T +L
Sbjct: 183 TALDVTVQAQILTLLKELKQELNMGLLFITHNLNIVRKIADNVSVMRHGKAVEHRATREL 242

Query: 243 LKAPQHPYTKKLLSSLPFRGRPRQIDLTSVPMISARDIIVDYAGRKSLFRKNKP-KRALH 301
             A +HPYT++LL+S P  G P   D  + P++   ++ V +  R+ L ++      AL 
Sbjct: 243 FNAARHPYTRQLLNSEP-EGYPDPADEQAAPLLRVENLQVAFPIRQGLMKRTVGYHHALK 301

Query: 302 GVSIDIHEGEVVALVGGSGSGKTTLGRTIAGLVTESEGRIQFQGRP----RTENWTDYRL 357
            +S  +  GE + LVG SGSGK+T    +  L+  S+G I F G P    R +     R 
Sbjct: 302 SLSFTLRPGESLGLVGESGSGKSTAALALLRLI-GSQGEIWFNGSPLHLWRRKKMLPVRR 360

Query: 358 NCQMVFQDPYSSLDPRMTIEALVEEALR-PVPGLDGKAKRKRTLETLEEVGLGVDYAGRY 416
             Q+VFQDP S+L+PR+ +  ++ E L+   P L+   +  R +  LEEVGL      RY
Sbjct: 361 QIQVVFQDPNSALNPRLNVLQIIAEGLQVHHPHLNAAEREARVITALEEVGLDPATRQRY 420

Query: 417 PHELSGGQRQRVAIARAIARRPRFLIADEPVSALDVTVRAQVLDLFSDLQKRYGFSCLFI 476
           P E SGGQRQR+AIARA+  +P+ +I DEP S+LD TV+ Q+L+L   LQ+++  + +FI
Sbjct: 421 PSEFSGGQRQRIAIARALILQPQLIILDEPTSSLDRTVQKQILELLKKLQQQHRLAYIFI 480

Query: 477 SHDLGVVEQVADRVVVMQDGRIIEEGDRDTIFDSPKEAYTRRLLS 521
           SHDL +V  +  ++VV++ G ++E+G  +TIF++  + YTR LL+
Sbjct: 481 SHDLRIVRSLCHQLVVLRQGEVVEQGRCETIFNAASQRYTRELLA 525



 Score =  152 bits (383), Expect = 4e-41
 Identities = 94/265 (35%), Positives = 147/265 (55%), Gaps = 22/265 (8%)

Query: 274 MISARDIIVDYAGRKSLFRKNKPKRALHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAGL 333
           ++S +D+ + +       ++ + ++ + G+S+ +  GE +ALVG SGSGK+    ++  L
Sbjct: 3   LLSIKDLSIAF------LQQGEQRQVVDGLSLSVDAGETLALVGESGSGKSVTALSVMRL 56

Query: 334 -----VTESEGRIQFQGRPRTENWTDYRL-------NCQMVFQDPYSSLDPRMTIEALVE 381
                V   +G I F G+       D R           M+FQ+P  SL+P   IE  + 
Sbjct: 57  LPTPPVVYPQGDILFAGQSVLH--ADERTLRGLRGNRIAMIFQEPMVSLNPLHNIEKQLY 114

Query: 382 EALRPVPGLDGKAKRKRTLETLEEVGL--GVDYAGRYPHELSGGQRQRVAIARAIARRPR 439
           E L    G+  +A R   L  LE VG+         YPH+LSGG+RQRV IA A+  +P 
Sbjct: 115 EVLSLHRGMRREAARGEMLSCLERVGIRQAAKRLHDYPHQLSGGERQRVMIAMALLTQPE 174

Query: 440 FLIADEPVSALDVTVRAQVLDLFSDLQKRYGFSCLFISHDLGVVEQVADRVVVMQDGRII 499
            LIADEP +ALDVTV+AQ+L L  +L++      LFI+H+L +V ++AD V VM+ G+ +
Sbjct: 175 LLIADEPTTALDVTVQAQILTLLKELKQELNMGLLFITHNLNIVRKIADNVSVMRHGKAV 234

Query: 500 EEGDRDTIFDSPKEAYTRRLLSAIP 524
           E      +F++ +  YTR+LL++ P
Sbjct: 235 EHRATRELFNAARHPYTRQLLNSEP 259