Pairwise Alignments

Query, 542 a.a., peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 623 a.a., ATPase components of various ABC-type transport systems, contain duplicated ATPase from Enterobacter asburiae PDN3

 Score =  405 bits (1042), Expect = e-117
 Identities = 233/549 (42%), Positives = 331/549 (60%), Gaps = 42/549 (7%)

Query: 24  VKSVSFDLAPGEIFGIVGESGSGKTLATRALISLLPPT---IKVADGSVSYKGRDVLKMK 80
           V+++SF L  GE   IVGESGSGK++   AL+ LL  T   I      +  + R V+ + 
Sbjct: 32  VQNLSFTLRRGETLAIVGESGSGKSVTALALMRLLEQTGGQISSEKMLLRRRNRQVIDLN 91

Query: 81  E---NELRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGLILHTKASAQERRSLILDMLK 137
           E   ++++ +RGA+I ++FQEPMTSLNP   +G Q+ E + LH   S  E  +    ML+
Sbjct: 92  ELSGSQMQGVRGADIAMIFQEPMTSLNPVFPVGEQIAESIRLHQGLSGDEALNEARRMLE 151

Query: 138 RVGIRDPEGALSSYPHEFSGGMRQRIMLASVMLLKPALLIADEPTTALDAVIQRDVMELM 197
            V I + +  L  YPH+ SGGMRQR+M+A  +  +PA+LIADEPTTALD  IQ  +++L+
Sbjct: 152 LVRIPEAQAILGRYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLI 211

Query: 198 VELTRAEGTAILLISHDLPMVARYTSRIVVMEKGAIVEKGRTEDLLKAPQHPYTKKLLSS 257
             L +     ++ I+HD+ +VA    R++VM KG+ VE G  E +  AP HPYTK LL++
Sbjct: 212 KVLQQEMEMGVIFITHDMGVVADIADRVLVMHKGSAVETGPVEQIFHAPVHPYTKALLAA 271

Query: 258 LPFRGR------PRQIDLTSV-------------------PMISARDIIVDYAGRKSLFR 292
           +P  G       PR+  L S+                   P++  RD++  +  R  +  
Sbjct: 272 VPRLGAMNGSDLPRRFPLISLEASEQQEDEREQDTVVPGKPILEVRDLVTRFPLRSGVL- 330

Query: 293 KNKPKRALHGV---SIDIHEGEVVALVGGSGSGKTTLGRTIAGLVTESEGRIQFQGRPRT 349
            N+ KR +H V   S D+  GE +ALVG SG GK+T GR +  LV   EG I F G  R 
Sbjct: 331 -NRVKREVHAVENVSFDLWPGETLALVGESGCGKSTTGRALLRLVESQEGSITFNGE-RI 388

Query: 350 ENWTDYRLNC-----QMVFQDPYSSLDPRMTIEALVEEALRPVPGLDGKAKRKRTLETLE 404
           +   D RL       Q +FQDPY+SLDPR T+   + E LR    LDG+A ++R    LE
Sbjct: 389 DTLPDSRLQAVRRDIQFIFQDPYASLDPRHTVGYSIMEPLRVHNLLDGEAAQRRVAWLLE 448

Query: 405 EVGLGVDYAGRYPHELSGGQRQRVAIARAIARRPRFLIADEPVSALDVTVRAQVLDLFSD 464
            VGL  ++A RYPHE SGGQRQR+ IARA+A  P+ +IADE VSALDV++RAQ+++L  D
Sbjct: 449 RVGLKPEHAWRYPHEFSGGQRQRICIARALALNPKVVIADESVSALDVSIRAQIINLLLD 508

Query: 465 LQKRYGFSCLFISHDLGVVEQVADRVVVMQDGRIIEEGDRDTIFDSPKEAYTRRLLSAIP 524
           LQ+  G + LFISHD+ VVE+++ RV VM  G+I+E G R  +F++P+  YTR+L++A+P
Sbjct: 509 LQRDMGIAFLFISHDMAVVERISHRVAVMFMGQIVEIGPRRAVFENPQHPYTRKLIAAVP 568

Query: 525 ALDQNEKGG 533
             D   + G
Sbjct: 569 VADPAHRHG 577



 Score =  160 bits (406), Expect = 1e-43
 Identities = 95/245 (38%), Positives = 136/245 (55%), Gaps = 17/245 (6%)

Query: 299 ALHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAGLVTESEGRIQFQG---RPRTENWTDY 355
           A+  +S  +  GE +A+VG SGSGK+     +  L+ ++ G+I  +    R R     D 
Sbjct: 31  AVQNLSFTLRRGETLAIVGESGSGKSVTALALMRLLEQTGGQISSEKMLLRRRNRQVIDL 90

Query: 356 R------------LNCQMVFQDPYSSLDPRMTIEALVEEALRPVPGLDGKAKRKRTLETL 403
                         +  M+FQ+P +SL+P   +   + E++R   GL G          L
Sbjct: 91  NELSGSQMQGVRGADIAMIFQEPMTSLNPVFPVGEQIAESIRLHQGLSGDEALNEARRML 150

Query: 404 EEVGLGVDYA--GRYPHELSGGQRQRVAIARAIARRPRFLIADEPVSALDVTVRAQVLDL 461
           E V +    A  GRYPH+LSGG RQRV IA A++ RP  LIADEP +ALDVT++AQ+L L
Sbjct: 151 ELVRIPEAQAILGRYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQL 210

Query: 462 FSDLQKRYGFSCLFISHDLGVVEQVADRVVVMQDGRIIEEGDRDTIFDSPKEAYTRRLLS 521
              LQ+      +FI+HD+GVV  +ADRV+VM  G  +E G  + IF +P   YT+ LL+
Sbjct: 211 IKVLQQEMEMGVIFITHDMGVVADIADRVLVMHKGSAVETGPVEQIFHAPVHPYTKALLA 270

Query: 522 AIPAL 526
           A+P L
Sbjct: 271 AVPRL 275