Pairwise Alignments

Query, 542 a.a., peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 566 a.a., ABC transporter ATP-binding protein from Dickeya dianthicola ME23

 Score =  378 bits (971), Expect = e-109
 Identities = 210/525 (40%), Positives = 311/525 (59%), Gaps = 26/525 (4%)

Query: 24  VKSVSFDLAPGEIFGIVGESGSGKTLATRALISLLPPTIKVADGSVSYKGRD-----VLK 78
           V+++SF + PGEI  +VGESGSGK++  R L+ L     ++   ++     D     +  
Sbjct: 29  VRNLSFQVNPGEILALVGESGSGKSVTARTLVGLAGERAQIQANAIELVRHDGSRCNLQT 88

Query: 79  MKENELRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGLILHTKASAQERRSLILDMLKR 138
           + + + + +RG EIG V Q+ + SL+P   IG+++ E L+ H  AS  +  + + ++L +
Sbjct: 89  LSDRQWQQVRGREIGFVLQDALVSLDPLRRIGQEVAEPLLTHKLASRSDVAARVAELLVQ 148

Query: 139 VGIRDPEGALSSYPHEFSGGMRQRIMLASVMLLKPALLIADEPTTALDAVIQRDVMELMV 198
           VGI DP    + YPHE SGG+RQR ++AS +   P LLIADEPTTALDA +Q+ V++L  
Sbjct: 149 VGIPDPANRAAQYPHELSGGLRQRALIASALAAGPKLLIADEPTTALDATVQQQVLKLFT 208

Query: 199 ELTRAEGTAILLISHDLPMVARYTSRIVVMEKGAIVEKGRTEDLLKAPQHPYTKKLLSSL 258
            L +A G  +LLI+HDL +V++   +++VM+ GA+VE+G    +L APQHPYT++LL+++
Sbjct: 209 ALAQA-GHGVLLITHDLAVVSQVADQVMVMQNGALVERGAARQVLSAPQHPYTRRLLAAI 267

Query: 259 PFRGRPRQIDLTSVPMISARDIIVDYAGRKS--------------LFRKNKPKR--ALHG 302
           P             P+      ++  AG                  F++    R  A++ 
Sbjct: 268 PTAATRGNWLAGENPLSQQASTLLSSAGEPGEKSGLALQVDGVSVSFKRPDGSRMTAVNN 327

Query: 303 VSIDIHEGEVVALVGGSGSGKTTLGRTIAGLVTESEGRIQFQGRPRT----ENWTDYRLN 358
           +S+ +  GE + +VG SGSGKTTLG+ I  L     G I   G+P +          R  
Sbjct: 328 ISLTVERGETLGIVGESGSGKTTLGKVILALQPPDSGDILLSGKPWSALSERERRPLRAR 387

Query: 359 CQMVFQDPYSSLDPRMTIEALVEEALRPVPGLDGKAKRKRTLETLEEVGLGVDYAGRYPH 418
            Q + QDP SS DP+ TIE L+ + LR    L  +A+++R L  LE VGL      R P 
Sbjct: 388 IQTITQDPLSSFDPQFTIEQLLLQPLRLRRDLSPQARQQRILALLELVGLSPTLLARRPQ 447

Query: 419 ELSGGQRQRVAIARAIARRPRFLIADEPVSALDVTVRAQVLDLFSDLQKRYGFSCLFISH 478
            LSGGQRQR++IA+A+A  P  L+ DEPVSALDVT +AQVLDL   LQ+R   S +FISH
Sbjct: 448 SLSGGQRQRISIAQALAAEPEVLVCDEPVSALDVTTQAQVLDLLVALQQRLHLSMVFISH 507

Query: 479 DLGVVEQVADRVVVMQDGRIIEEGDRDTIFDSPKEAYTRRLLSAI 523
           DLGVV+ ++ R+ VM+DG ++E G  + IF+ P+  YTR+LLS +
Sbjct: 508 DLGVVQHMSHRIAVMKDGNVVERGTVEQIFNQPQHPYTRQLLSTV 552



 Score =  155 bits (392), Expect = 4e-42
 Identities = 102/248 (41%), Positives = 131/248 (52%), Gaps = 23/248 (9%)

Query: 296 PKRALHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAGLVTESEGRIQFQGRP-------- 347
           P  ++  +S  ++ GE++ALVG SGSGK+   RT+ GL  E   R Q Q           
Sbjct: 25  PVESVRNLSFQVNPGEILALVGESGSGKSVTARTLVGLAGE---RAQIQANAIELVRHDG 81

Query: 348 --------RTENWTDYR-LNCQMVFQDPYSSLDPRMTIEALVEEALRPVPGLDGKAKRKR 398
                       W   R      V QD   SLDP   I   V E L             R
Sbjct: 82  SRCNLQTLSDRQWQQVRGREIGFVLQDALVSLDPLRRIGQEVAEPLLTHKLASRSDVAAR 141

Query: 399 TLETLEEVGLG--VDYAGRYPHELSGGQRQRVAIARAIARRPRFLIADEPVSALDVTVRA 456
             E L +VG+    + A +YPHELSGG RQR  IA A+A  P+ LIADEP +ALD TV+ 
Sbjct: 142 VAELLVQVGIPDPANRAAQYPHELSGGLRQRALIASALAAGPKLLIADEPTTALDATVQQ 201

Query: 457 QVLDLFSDLQKRYGFSCLFISHDLGVVEQVADRVVVMQDGRIIEEGDRDTIFDSPKEAYT 516
           QVL LF+ L +  G   L I+HDL VV QVAD+V+VMQ+G ++E G    +  +P+  YT
Sbjct: 202 QVLKLFTALAQA-GHGVLLITHDLAVVSQVADQVMVMQNGALVERGAARQVLSAPQHPYT 260

Query: 517 RRLLSAIP 524
           RRLL+AIP
Sbjct: 261 RRLLAAIP 268