Pairwise Alignments

Query, 542 a.a., peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 566 a.a., ABC transporter ATP-binding protein from Dickeya dadantii 3937

 Score =  380 bits (976), Expect = e-110
 Identities = 220/548 (40%), Positives = 325/548 (59%), Gaps = 28/548 (5%)

Query: 3   MDKLLTVCGLSLEVARTGQQV--VKSVSFDLAPGEIFGIVGESGSGKTLATRALISLLPP 60
           +  LL V GL++        V  V+ +SF + PGEI  +VGESGSGK++  R L+ L   
Sbjct: 6   LQPLLRVDGLNVTFPSPHGPVESVRDLSFQVNPGEILALVGESGSGKSVTARTLVGLAGE 65

Query: 61  TIKVADGSVSYKGRD-----VLKMKENELRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEE 115
             ++   ++     D     +  + + + + +RG EIG V Q+ + SL+P   IG+++ E
Sbjct: 66  RAQIQANAIELVRHDGSRCDLQTLSDRQWQQVRGREIGFVLQDALVSLDPLRRIGQEVAE 125

Query: 116 GLILHTKASAQERRSLILDMLKRVGIRDPEGALSSYPHEFSGGMRQRIMLASVMLLKPAL 175
            L+ H  AS  +  + + ++L +VGI DP    + YPHE SGG+RQR ++AS +   P L
Sbjct: 126 PLLTHKLASRNDVATRVAELLAQVGIPDPANRAAQYPHELSGGLRQRALIASALAAGPKL 185

Query: 176 LIADEPTTALDAVIQRDVMELMVELTRAEGTAILLISHDLPMVARYTSRIVVMEKGAIVE 235
           LIADEPTTALDA +Q+ V++L   L +A G  +LLI+HDL +V++   R++VM+KGA+VE
Sbjct: 186 LIADEPTTALDATVQQQVLKLFTALAQA-GHGVLLITHDLAVVSQVADRVMVMQKGALVE 244

Query: 236 KGRTEDLLKAPQHPYTKKLLSSLPF---RGRPRQIDLTSVPMISARDIIVDYAGRKS--- 289
           +G    +L APQHPYT++LL+++P    R      +    P  S     V  +G KS   
Sbjct: 245 RGPARQVLSAPQHPYTRRLLAAIPTAATRSNWLAGENPLSPQASTLLSSVGESGEKSGLA 304

Query: 290 --------LFRKNKPKR--ALHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAGLVTESEG 339
                    F++    R  A++ +S+ +  GE + +VG SGSGKTTLG+ +  L     G
Sbjct: 305 LQVDGVSVSFKRPDGSRMTAVNNISLTVERGETLGIVGESGSGKTTLGKVMLALQPPDSG 364

Query: 340 RIQFQGRPRTE----NWTDYRLNCQMVFQDPYSSLDPRMTIEALVEEALRPVPGLDGKAK 395
            I+  G+P +          R + Q + QDP SS DP+ TIE ++ + LR    L  +A+
Sbjct: 365 DIRLSGQPWSSLTERERRPLRASIQTITQDPLSSFDPQFTIEQILLQPLRLRRDLSPQAR 424

Query: 396 RKRTLETLEEVGLGVDYAGRYPHELSGGQRQRVAIARAIARRPRFLIADEPVSALDVTVR 455
           ++R L  LE VGL      R P  LSGGQRQR++IA+A+A  P  LI DEPVSALDVT +
Sbjct: 425 QQRILALLELVGLSPTLLSRRPQSLSGGQRQRISIAQALAAEPEVLICDEPVSALDVTTQ 484

Query: 456 AQVLDLFSDLQKRYGFSCLFISHDLGVVEQVADRVVVMQDGRIIEEGDRDTIFDSPKEAY 515
           AQVLDL   LQ+R   + +FISHDLGVV+ ++ R+ VM+DG ++E G  + IF+ P+  Y
Sbjct: 485 AQVLDLLVALQQRLQLTMVFISHDLGVVQHMSHRIAVMKDGNVVERGTVEQIFNQPQHPY 544

Query: 516 TRRLLSAI 523
           TR+LLS +
Sbjct: 545 TRQLLSTV 552



 Score =  156 bits (395), Expect = 2e-42
 Identities = 103/248 (41%), Positives = 130/248 (52%), Gaps = 23/248 (9%)

Query: 296 PKRALHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAGLVTESEGRIQFQGRP-------- 347
           P  ++  +S  ++ GE++ALVG SGSGK+   RT+ GL  E   R Q Q           
Sbjct: 25  PVESVRDLSFQVNPGEILALVGESGSGKSVTARTLVGLAGE---RAQIQANAIELVRHDG 81

Query: 348 --------RTENWTDYR-LNCQMVFQDPYSSLDPRMTIEALVEEALRPVPGLDGKAKRKR 398
                       W   R      V QD   SLDP   I   V E L             R
Sbjct: 82  SRCDLQTLSDRQWQQVRGREIGFVLQDALVSLDPLRRIGQEVAEPLLTHKLASRNDVATR 141

Query: 399 TLETLEEVGLG--VDYAGRYPHELSGGQRQRVAIARAIARRPRFLIADEPVSALDVTVRA 456
             E L +VG+    + A +YPHELSGG RQR  IA A+A  P+ LIADEP +ALD TV+ 
Sbjct: 142 VAELLAQVGIPDPANRAAQYPHELSGGLRQRALIASALAAGPKLLIADEPTTALDATVQQ 201

Query: 457 QVLDLFSDLQKRYGFSCLFISHDLGVVEQVADRVVVMQDGRIIEEGDRDTIFDSPKEAYT 516
           QVL LF+ L +  G   L I+HDL VV QVADRV+VMQ G ++E G    +  +P+  YT
Sbjct: 202 QVLKLFTALAQA-GHGVLLITHDLAVVSQVADRVMVMQKGALVERGPARQVLSAPQHPYT 260

Query: 517 RRLLSAIP 524
           RRLL+AIP
Sbjct: 261 RRLLAAIP 268