Pairwise Alignments

Query, 542 a.a., peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 555 a.a., ABC transporter, nucleotide binding/ATPase protein (peptide) from Agrobacterium fabrum C58

 Score =  386 bits (991), Expect = e-111
 Identities = 224/557 (40%), Positives = 331/557 (59%), Gaps = 48/557 (8%)

Query: 6   LLTVCGLSLEV-ARTGQQV-VKSVSFDLAPGEIFGIVGESGSGKTLATRALISLLPPTIK 63
           LL V  LS+   +R+G+ V V+++SFD+A GE   +VGESG GK+    AL +LLP    
Sbjct: 5   LLGVRDLSVRYHSRSGEAVAVENLSFDIAAGEAVALVGESGCGKSTTALALSNLLPDEAS 64

Query: 64  VADGSVSYKGRDVLKMKENELRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGLILHTKA 123
            + G V++ G D+ ++     R + G  IG++FQEPM++LNP  T+G Q+ E L  H + 
Sbjct: 65  -SSGEVTFDGLDLFRLPPKAWRPILGPRIGMIFQEPMSALNPVYTVGDQIAEVLHAHERL 123

Query: 124 SAQERRSLILDMLKRVGIRDPEGALSSYPHEFSGGMRQRIMLASVMLLKPALLIADEPTT 183
           S +  RS +L++L  V + +P   ++SYPHE SGG RQR M+A  + L P LLIADEPTT
Sbjct: 124 SRKAARSRVLELLDLVSMPEPHRRIASYPHELSGGQRQRAMIAQAIALTPLLLIADEPTT 183

Query: 184 ALDAVIQRDVMELMVELTRAEGTAILLISHDLPMVARYTSRIVVMEKGAIVEKGRTEDLL 243
           ALD+ IQ  ++EL+  L R     +LLISHDL +V+R+T R+VVM  G  +E+ + E L 
Sbjct: 184 ALDSTIQSQILELIDRLRRDLSMGLLLISHDLTLVSRWTDRVVVMHNGKRMEELKAEHLF 243

Query: 244 KAPQHPYTKKLLS----------------------------------SLPFRGRPRQIDL 269
           +  QHPYTK L+                                   S P    PR  + 
Sbjct: 244 QESQHPYTKGLIGASIRLGDGRHASSERLNEIRTHRNSNGTTSFEIRSPPVAAEPR-TNA 302

Query: 270 TSVPMISARDIIVDYAGRKSLFRKNKPKRALHGVSIDIHEGEVVALVGGSGSGKTTLGRT 329
           T+  ++   D+ V Y         +K   A+  V+ ++  GE + LVG SGSGK++L + 
Sbjct: 303 TADALLEVEDLTVRYD------PASKTPPAVDRVTFELLRGETLGLVGESGSGKSSLSKA 356

Query: 330 IAGLVTESEGRIQFQGRPRTE----NWTDYRLNCQMVFQDPYSSLDPRMTIEALVEEALR 385
           ++ L+  + G+I F+G+  T     +   +R   QM+FQDPYSSL+PR T+  +++  L 
Sbjct: 357 LSRLIPVAGGQILFEGQDITHAGGADLRAFRGRVQMIFQDPYSSLNPRRTVGDILDSVLH 416

Query: 386 PVPGLDGKAKRKRTLETLEEVGLGVDYAGRYPHELSGGQRQRVAIARAIARRPRFLIADE 445
                +   ++ R  E L++V L      R+PHE SGGQRQR+AIARA+  RP  +I DE
Sbjct: 417 AHKYRNSADRQSRISEALDQVRLPRSAVERFPHEFSGGQRQRIAIARALIVRPSLVICDE 476

Query: 446 PVSALDVTVRAQVLDLFSDLQKRYGFSCLFISHDLGVVEQVADRVVVMQDGRIIEEGDRD 505
           PVSALDV+V+AQ+L+L +DL++  G S LFISHDL VV+ ++DR++VM+DG IIE G+  
Sbjct: 477 PVSALDVSVQAQILNLLADLKEEAGLSYLFISHDLAVVKYISDRIMVMKDGHIIERGNHQ 536

Query: 506 TIFDSPKEAYTRRLLSA 522
            ++ +P   YTR+L++A
Sbjct: 537 NLWSNPSHEYTRKLIAA 553



 Score =  182 bits (463), Expect = 2e-50
 Identities = 102/258 (39%), Positives = 159/258 (61%), Gaps = 9/258 (3%)

Query: 2   TMDKLLTVCGLSL--EVARTGQQVVKSVSFDLAPGEIFGIVGESGSGKTLATRALISLLP 59
           T D LL V  L++  + A      V  V+F+L  GE  G+VGESGSGK+  ++AL  L+P
Sbjct: 303 TADALLEVEDLTVRYDPASKTPPAVDRVTFELLRGETLGLVGESGSGKSSLSKALSRLIP 362

Query: 60  PTIKVADGSVSYKGRDVLKMKENELRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGLIL 119
               VA G + ++G+D+      +LR  RG  + ++FQ+P +SLNP  T+G  L+  L  
Sbjct: 363 ----VAGGQILFEGQDITHAGGADLRAFRG-RVQMIFQDPYSSLNPRRTVGDILDSVLHA 417

Query: 120 HTKASAQERRSLILDMLKRVGIRDPEGALSSYPHEFSGGMRQRIMLASVMLLKPALLIAD 179
           H   ++ +R+S I + L +V  R P  A+  +PHEFSGG RQRI +A  ++++P+L+I D
Sbjct: 418 HKYRNSADRQSRISEALDQV--RLPRSAVERFPHEFSGGQRQRIAIARALIVRPSLVICD 475

Query: 180 EPTTALDAVIQRDVMELMVELTRAEGTAILLISHDLPMVARYTSRIVVMEKGAIVEKGRT 239
           EP +ALD  +Q  ++ L+ +L    G + L ISHDL +V   + RI+VM+ G I+E+G  
Sbjct: 476 EPVSALDVSVQAQILNLLADLKEEAGLSYLFISHDLAVVKYISDRIMVMKDGHIIERGNH 535

Query: 240 EDLLKAPQHPYTKKLLSS 257
           ++L   P H YT+KL+++
Sbjct: 536 QNLWSNPSHEYTRKLIAA 553



 Score =  159 bits (402), Expect = 3e-43
 Identities = 101/262 (38%), Positives = 143/262 (54%), Gaps = 16/262 (6%)

Query: 271 SVPMISARDIIVDYAGRKSLFRKNKPKRALHGVSIDIHEGEVVALVGGSGSGKTTLGRTI 330
           ++P++  RD+ V Y  R           A+  +S DI  GE VALVG SG GK+T    +
Sbjct: 2   AIPLLGVRDLSVRYHSRSG------EAVAVENLSFDIAAGEAVALVGESGCGKSTTALAL 55

Query: 331 AGLVTE---SEGRIQFQG----RPRTENWTDYR-LNCQMVFQDPYSSLDPRMTIEALVEE 382
           + L+ +   S G + F G    R   + W         M+FQ+P S+L+P  T+   + E
Sbjct: 56  SNLLPDEASSSGEVTFDGLDLFRLPPKAWRPILGPRIGMIFQEPMSALNPVYTVGDQIAE 115

Query: 383 ALRPVPGLDGKAKRKRTLETLEEVGLGVDYA--GRYPHELSGGQRQRVAIARAIARRPRF 440
            L     L  KA R R LE L+ V +   +     YPHELSGGQRQR  IA+AIA  P  
Sbjct: 116 VLHAHERLSRKAARSRVLELLDLVSMPEPHRRIASYPHELSGGQRQRAMIAQAIALTPLL 175

Query: 441 LIADEPVSALDVTVRAQVLDLFSDLQKRYGFSCLFISHDLGVVEQVADRVVVMQDGRIIE 500
           LIADEP +ALD T+++Q+L+L   L++      L ISHDL +V +  DRVVVM +G+ +E
Sbjct: 176 LIADEPTTALDSTIQSQILELIDRLRRDLSMGLLLISHDLTLVSRWTDRVVVMHNGKRME 235

Query: 501 EGDRDTIFDSPKEAYTRRLLSA 522
           E   + +F   +  YT+ L+ A
Sbjct: 236 ELKAEHLFQESQHPYTKGLIGA 257