Pairwise Alignments
Query, 542 a.a., peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021
Subject, 511 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58
Score = 423 bits (1088), Expect = e-123
Identities = 223/504 (44%), Positives = 324/504 (64%), Gaps = 8/504 (1%)
Query: 24 VKSVSFDLAPGEIFGIVGESGSGKTLATRALISLLPPTIKVADGSVSYKGRDVLKMKENE 83
VK + D+ GE +VGESGSGK+ ++ LL + +GS Y+G +++ + NE
Sbjct: 4 VKGIDIDVKQGETLAVVGESGSGKSQTMMGIMGLLASN-GIIEGSAKYRGHELIGLPVNE 62
Query: 84 LRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGLILHTKASAQERRSLILDMLKRVGIRD 143
L +RGA+I ++FQEPMTSL+P IG Q+ E +I H S ++ R+ +L++LK VGI +
Sbjct: 63 LNDIRGAKITMIFQEPMTSLDPLYRIGAQIAEPIIYHRGGSKRQARARVLELLKLVGIPE 122
Query: 144 PEGALSSYPHEFSGGMRQRIMLASVMLLKPALLIADEPTTALDAVIQRDVMELMVELTRA 203
PE + SYPHE SGG RQR+M+A + +P +LIADEPTTALD IQ +++L+ L +
Sbjct: 123 PERRIDSYPHELSGGQRQRVMIAMALANEPDILIADEPTTALDVTIQAQILDLLKSLQQR 182
Query: 204 EGTAILLISHDLPMVARYTSRIVVMEKGAIVEKGRTEDLLKAPQHPYTKKLLSSLPFRGR 263
G A++LI+HDL +V + +R+ VM +G IVE G TED+ + PQ YTK LL + P +
Sbjct: 183 FGMAVVLITHDLGVVRHFANRVAVMRRGEIVETGTTEDIFERPQADYTKMLLDAEPSGHK 242
Query: 264 PRQIDLTSVPMISARDIIVDYAGRKSLFRKNKPKRALHGVSIDIHEGEVVALVGGSGSGK 323
P + + ++S +++ +DY K+ RA+ V++D+H+G+ + +VG SGSGK
Sbjct: 243 P-AVGSEAPVVLSGKNVTIDYKIPGGFLSKSSKFRAVDSVNVDLHQGQTIGIVGESGSGK 301
Query: 324 TTLGRTIAGLVTESEGRIQFQGRPRT----ENWTDYRLNCQMVFQDPYSSLDPRMTIEAL 379
+TLGR + L+ SEGRI F T + R + Q+VFQDPY SL PR T+ +
Sbjct: 302 STLGRALLRLIV-SEGRIFFGKTEITGLDRKAMRPLRRHLQLVFQDPYGSLSPRQTVGEI 360
Query: 380 VEEALRPVPGLDGKAKR-KRTLETLEEVGLGVDYAGRYPHELSGGQRQRVAIARAIARRP 438
+ E L +A+R KR +E L+EVGL RYPHE SGGQRQR+AIARAI +P
Sbjct: 361 ITEGLFVHEQQLSRAERDKRAIEALKEVGLDPAARNRYPHEFSGGQRQRIAIARAIILKP 420
Query: 439 RFLIADEPVSALDVTVRAQVLDLFSDLQKRYGFSCLFISHDLGVVEQVADRVVVMQDGRI 498
+I DEP SALD +V+ QV+DL DLQK +G S +FISHDL V++ ++D V+VM++G+I
Sbjct: 421 EVVILDEPTSALDRSVQGQVIDLLRDLQKAHGLSYIFISHDLSVIKAISDYVIVMRNGKI 480
Query: 499 IEEGDRDTIFDSPKEAYTRRLLSA 522
+EEG+ D IF P YT+ L+ +
Sbjct: 481 VEEGETDAIFSRPTAEYTKTLIKS 504
Score = 176 bits (447), Expect = 1e-48
Identities = 104/237 (43%), Positives = 142/237 (59%), Gaps = 10/237 (4%)
Query: 299 ALHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAGLVTES---EGRIQFQGRPR----TEN 351
A+ G+ ID+ +GE +A+VG SGSGK+ I GL+ + EG +++G
Sbjct: 3 AVKGIDIDVKQGETLAVVGESGSGKSQTMMGIMGLLASNGIIEGSAKYRGHELIGLPVNE 62
Query: 352 WTDYR-LNCQMVFQDPYSSLDPRMTIEALVEEALRPVPGLDGKAKRKRTLETLEEVGLGV 410
D R M+FQ+P +SLDP I A + E + G + R R LE L+ VG+
Sbjct: 63 LNDIRGAKITMIFQEPMTSLDPLYRIGAQIAEPIIYHRGGSKRQARARVLELLKLVGIPE 122
Query: 411 DYA--GRYPHELSGGQRQRVAIARAIARRPRFLIADEPVSALDVTVRAQVLDLFSDLQKR 468
YPHELSGGQRQRV IA A+A P LIADEP +ALDVT++AQ+LDL LQ+R
Sbjct: 123 PERRIDSYPHELSGGQRQRVMIAMALANEPDILIADEPTTALDVTIQAQILDLLKSLQQR 182
Query: 469 YGFSCLFISHDLGVVEQVADRVVVMQDGRIIEEGDRDTIFDSPKEAYTRRLLSAIPA 525
+G + + I+HDLGVV A+RV VM+ G I+E G + IF+ P+ YT+ LL A P+
Sbjct: 183 FGMAVVLITHDLGVVRHFANRVAVMRRGEIVETGTTEDIFERPQADYTKMLLDAEPS 239
Score = 172 bits (437), Expect = 2e-47
Identities = 97/237 (40%), Positives = 146/237 (61%), Gaps = 9/237 (3%)
Query: 22 QVVKSVSFDLAPGEIFGIVGESGSGKTLATRALISLLPPTIKVADGSVSYKGRDVLKMKE 81
+ V SV+ DL G+ GIVGESGSGK+ RAL+ L+ V++G + + ++ +
Sbjct: 276 RAVDSVNVDLHQGQTIGIVGESGSGKSTLGRALLRLI-----VSEGRIFFGKTEITGLDR 330
Query: 82 NELRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGLILH-TKASAQERRSLILDMLKRVG 140
+R LR + +VFQ+P SL+P T+G + EGL +H + S ER ++ LK VG
Sbjct: 331 KAMRPLR-RHLQLVFQDPYGSLSPRQTVGEIITEGLFVHEQQLSRAERDKRAIEALKEVG 389
Query: 141 IRDPEGALSSYPHEFSGGMRQRIMLASVMLLKPALLIADEPTTALDAVIQRDVMELMVEL 200
+ DP A + YPHEFSGG RQRI +A ++LKP ++I DEPT+ALD +Q V++L+ +L
Sbjct: 390 L-DP-AARNRYPHEFSGGQRQRIAIARAIILKPEVVILDEPTSALDRSVQGQVIDLLRDL 447
Query: 201 TRAEGTAILLISHDLPMVARYTSRIVVMEKGAIVEKGRTEDLLKAPQHPYTKKLLSS 257
+A G + + ISHDL ++ + ++VM G IVE+G T+ + P YTK L+ S
Sbjct: 448 QKAHGLSYIFISHDLSVIKAISDYVIVMRNGKIVEEGETDAIFSRPTAEYTKTLIKS 504