Pairwise Alignments

Query, 542 a.a., peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 568 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  377 bits (968), Expect = e-109
 Identities = 212/538 (39%), Positives = 314/538 (58%), Gaps = 34/538 (6%)

Query: 18  RTGQ-QVVKSVSFDLAPGEIFGIVGESGSGKTLATRALISLLPPTIKVADGSVSYKGRD- 75
           RTG  + V  +SF + PG+   +VGESGSGK++  R+++ ++     +  GS+     D 
Sbjct: 20  RTGVFRAVNDISFSIEPGKTLCVVGESGSGKSVTARSILQIIDSPGYITSGSIILNKADG 79

Query: 76  ------VLKMKENELRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGLILHTKASAQERR 129
                  L  +   +R +RGA+I ++FQEPM+SL+P  T+G Q+ E L LH K S  + R
Sbjct: 80  SSVDLAKLDPRGRAIRAVRGADIAMIFQEPMSSLSPVHTVGDQITEVLRLHLKMSKAQAR 139

Query: 130 SLILDMLKRVGIRDPEGALSSYPHEFSGGMRQRIMLASVMLLKPALLIADEPTTALDAVI 189
           +  +++L++V I +PE AL  Y  ++SGGMRQR M+A  +  KP LLIADEPTTALD   
Sbjct: 140 AEAIELLRQVEIPNPEKALDRYAFQYSGGMRQRAMIAMALACKPQLLIADEPTTALDVTT 199

Query: 190 QRDVMELMVELTRAEGTAILLISHDLPMVARYTSRIVVMEKGAIVEKGRTEDLLKAPQHP 249
           Q ++++L+  L +A G A+L I+HD+ +VA+    ++VM  G + E G  E +   PQ P
Sbjct: 200 QAEILDLISRLQKAHGMAVLFITHDMGVVAQIADDVLVMHHGVVKEYGTVEQIFHKPQDP 259

Query: 250 YTKKLLSSL-------PFRGRPRQIDLTSVPMISARDIIVDYAGRKSLFRKNKPKRALHG 302
           YT+ L+ S+         R     +D T+ P++  +D+ + +   K          AL G
Sbjct: 260 YTRMLIGSVLKLEQKAEIRLARPPLDQTAAPILEVKDLSMHFGEMK----------ALDG 309

Query: 303 VSIDIHEGEVVALVGGSGSGKTTLGRTIAGLVTESEGRIQFQ---------GRPRTENWT 353
           VSI +  GE + +VG SGSGKTT+GR+I  L   + G + ++          +   +   
Sbjct: 310 VSIKLLPGETLGIVGESGSGKTTMGRSIMRLYDPTAGEMLYRRADGSVVDLSKIEGKELK 369

Query: 354 DYRLNCQMVFQDPYSSLDPRMTIEALVEEALRPVPGLDGKAKRKRTLETLEEVGLGVDYA 413
             R   +MVFQDP+ SL+PRMT+  ++ E L       GK   +R    +E+VGL     
Sbjct: 370 AARRELRMVFQDPFGSLNPRMTVAQVIGEPLLVNGIAKGKELEERVCSLMEQVGLDPSGR 429

Query: 414 GRYPHELSGGQRQRVAIARAIARRPRFLIADEPVSALDVTVRAQVLDLFSDLQKRYGFSC 473
            RYPH  SGGQRQR+ IARAI  RPR ++ADE  SALDV+VR QVLDL   LQ   G + 
Sbjct: 430 ERYPHAFSGGQRQRIGIARAITLRPRIIVADEATSALDVSVRFQVLDLLMKLQDELGLAY 489

Query: 474 LFISHDLGVVEQVADRVVVMQDGRIIEEGDRDTIFDSPKEAYTRRLLSAIPALDQNEK 531
           +FISHD+GV+  + DRV VM  G+++E G+ + + ++P   YT+ LLSAIP  D  ++
Sbjct: 490 IFISHDIGVIRYMCDRVGVMYRGKLVEVGEAEKVCNAPDHPYTQALLSAIPRPDPRDR 547