Pairwise Alignments

Query, 542 a.a., peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 611 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  402 bits (1034), Expect = e-116
 Identities = 226/561 (40%), Positives = 327/561 (58%), Gaps = 33/561 (5%)

Query: 4   DKLLTVCGL--SLEVARTGQQVVKSVSFDLAPGEIFGIVGESGSGKTLATRALISLLPPT 61
           D +L+V  L  S  V    + VV+ +SFD+ PGE   IVGESGSGK++ + +++ LL   
Sbjct: 13  DAVLSVRNLTTSFHVDGGWKPVVRDISFDVGPGETVAIVGESGSGKSVTSLSIMRLLDRE 72

Query: 62  IKVADGSVSYKGRDVLKMKENELRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEEGLILHT 121
                G +   GR++L + E+ +R +RG E+ ++FQEPMTSLNP  TIG Q+ E L+ H 
Sbjct: 73  SSRVQGEILLGGRNLLSLSEDAMRRVRGNEVAMIFQEPMTSLNPLFTIGDQISEALLCHQ 132

Query: 122 KASAQERRSLILDMLKRVGIRDPEGALSSYPHEFSGGMRQRIMLASVMLLKPALLIADEP 181
             S  E R+  + +L++V I         YPH FSGGMRQR+M+A  +  KP LLIADEP
Sbjct: 133 PMSKAEARAETVRLLEKVRIPSAASRFDEYPHRFSGGMRQRVMIAMALASKPKLLIADEP 192

Query: 182 TTALDAVIQRDVMELMVELTRAEGTAILLISHDLPMVARYTSRIVVMEKGAIVEKGRTED 241
           TTALD  IQ  +++L+  L   EGT++L I+HD+ +VA    R VVM +G  VE G T D
Sbjct: 193 TTALDVTIQGQILDLIKTLQEEEGTSVLFITHDMGVVAEIADRTVVMYRGEQVEVGATAD 252

Query: 242 LLKAPQHPYTKKLLSSLPFRG------RPRQ--------------------IDLTSVPMI 275
           +    +HPYT+ LLS++P  G      RP +                    +D ++ P++
Sbjct: 253 IFHRGKHPYTRALLSAVPVLGSMKGEERPLRFPIVNTATGETQEPVRPADTVDASAQPVL 312

Query: 276 SARDIIVDYAGRKSLF-RKNKPKRALHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAGLV 334
               +   +     L  R +    A+  VS D+  GE ++LVG SG GK+T GR I  L+
Sbjct: 313 KVEGLTKRFDIHSGLLGRLSGRVHAVENVSFDLRAGETLSLVGESGCGKSTTGRAIMRLI 372

Query: 335 TESEGRIQFQGRP----RTENWTDYRLNCQMVFQDPYSSLDPRMTIEALVEEALRPVPGL 390
               G +   G            + R   QM+FQDP++SL+PRMT+ A + E        
Sbjct: 373 EPDAGSVVVNGENILTLDKSGMREMRKTVQMIFQDPFASLNPRMTVGAAIAEPFLEHRMG 432

Query: 391 DGKAKRKRTLETLEEVGLGVDYAGRYPHELSGGQRQRVAIARAIARRPRFLIADEPVSAL 450
             +  ++   + L +VGL  D A RYPHE SGGQRQR+ IARA+A +P+ ++ADE VSAL
Sbjct: 433 SAREAKEVVADMLNKVGLSPDMAARYPHEFSGGQRQRICIARALALQPKVIVADESVSAL 492

Query: 451 DVTVRAQVLDLFSDLQKRYGFSCLFISHDLGVVEQVADRVVVMQDGRIIEEGDRDTIFDS 510
           DV+++AQV++L  DLQ+    + LFISHD+ VVE+V+ RV VM  G I+E G R  +FD+
Sbjct: 493 DVSIKAQVINLMLDLQQSLDLAFLFISHDMAVVERVSHRVAVMYLGEIVEIGPRADVFDN 552

Query: 511 PKEAYTRRLLSAIPALDQNEK 531
           P+  YTR+L++A+P  D + +
Sbjct: 553 PQHDYTRKLMAAVPVPDPDRR 573