Pairwise Alignments

Query, 276 a.a., transposase ISRM1 from Sinorhizobium meliloti 1021

Subject, 269 a.a., IS3 family transposase ISRle5 from Xanthobacter sp. DMC5

 Score = 70.1 bits (170), Expect = 5e-17
 Identities = 73/270 (27%), Positives = 111/270 (41%), Gaps = 31/270 (11%)

Query: 2   KSVCETLGVARSNIAARAAGSPSRARGRPPLPDRELVEDIKAVIADMPTYGYRRVHAILR 61
           +  C TL V R+  A ++       RG       EL + IK +      YGYRRVH +LR
Sbjct: 13  RRACATLAVDRALYAYKSK------RGA----QAELNQRIKEICETRVRYGYRRVHILLR 62

Query: 62  RNARKLGRSWPNAKRVYRVMK-----LHNLLLVRHTGAVDNRLHEGQVAVERSNIRWCSD 116
           R    +     N KR+YR+ K     L N +  R   A   +L + +    RSN  W  D
Sbjct: 63  REGWSV-----NPKRIYRLYKDLGLQLRNKVPKRRVKA---KLRDDRHPATRSNETWAMD 114

Query: 117 GFEIGCDNKEKVRVAFALDCCDREAIAHVATTEGIKSQDVQDLVITAVENRFGRINMLSE 176
                     K+RV   +D   R + A     +   S   +D+V+T    R  R   +  
Sbjct: 115 FVHDQLATGRKIRVLTIVDTFTRFSPA----VDPRFSYRGEDVVLTL--ERICR--SMGY 166

Query: 177 PIEWLTDNGSCFIAKDTASLLRDIGMEPCTTPVRSPQSNGMAEAFVKTFKRDYVAVNPTP 236
           P     D GS F+++D        G+    +    P  NG  E+F   F+ + +  +   
Sbjct: 167 PQSIRVDQGSEFVSRDLDLWAYQKGVVLDFSRPGKPTDNGFIESFNGKFRAECLNTHWFM 226

Query: 237 DAETVMAQLPFWFEHYNNLHPHSALGYQSP 266
             +   A++  W   YN + PHSA+G + P
Sbjct: 227 SLDDARAKMEAWRRDYNEVRPHSAIGNKPP 256