Pairwise Alignments

Query, 276 a.a., transposase ISRM1 from Sinorhizobium meliloti 1021

Subject, 220 a.a., IS3 family transposase ISRle5 from Xanthobacter sp. DMC5

 Score = 62.4 bits (150), Expect = 8e-15
 Identities = 60/221 (27%), Positives = 92/221 (41%), Gaps = 21/221 (9%)

Query: 51  YGYRRVHAILRRNARKLGRSWPNAKRVYRVMK-----LHNLLLVRHTGAVDNRLHEGQVA 105
           YGYRRVH +LRR    +     N KR+YR+ K     L N +  R   A   +L + +  
Sbjct: 3   YGYRRVHILLRREGWAV-----NPKRIYRLYKDLGLQLRNKVPKRRVKA---KLRDDRRP 54

Query: 106 VERSNIRWCSDGFEIGCDNKEKVRVAFALDCCDREAIAHVATTEGIKSQDVQDLVITAVE 165
             RSN  W  D          K+RV   +D   R + A     +   S   +D+V+T   
Sbjct: 55  ATRSNETWAMDFVHDQLATGRKIRVLTIVDTFTRFSPA----VDPRFSYRGEDVVLTL-- 108

Query: 166 NRFGRINMLSEPIEWLTDNGSCFIAKDTASLLRDIGMEPCTTPVRSPQSNGMAEAFVKTF 225
            R  R     + I    D GS F+++D        G+    +    P  NG  E+F    
Sbjct: 109 ERICRSTGYPQSIR--VDQGSEFVSRDLDLWAYQKGVVLDFSRPGKPTDNGFIESFNGKL 166

Query: 226 KRDYVAVNPTPDAETVMAQLPFWFEHYNNLHPHSALGYQSP 266
           + + +  +     +   A++  W   YN + PHSA+G + P
Sbjct: 167 RAECLNTHWFMSLDDARAKMEAWRRDYNEVRPHSAIGNKPP 207