Pairwise Alignments

Query, 276 a.a., transposase ISRM1 from Sinorhizobium meliloti 1021

Subject, 247 a.a., Transposase from Variovorax sp. SCN45

 Score = 53.5 bits (127), Expect = 4e-12
 Identities = 54/242 (22%), Positives = 91/242 (37%), Gaps = 14/242 (5%)

Query: 35  RELVEDIKAVIADMPTYGYRRVHAILRRNARKLGRSWPNAKRVYRVMKLHNLLLVRHTGA 94
           +EL   I  +      +GYRR+H +LR +   +     N K+VYR+    NL + +   A
Sbjct: 3   QELSSKIVEIAHVRRRFGYRRIHDMLRPHFPGV-----NHKKVYRLYSAANLAVRKRRKA 57

Query: 95  VDNRLHEGQVAVERS-NIRWCSDGFEIGCDNKEKVRVAFALDCCDREAIAHVATTEGIKS 153
                    + + R+ N  W  D          +++     D    E ++ ++   GI  
Sbjct: 58  KRPVSERVPLQLARTVNEVWSMDFVSDSLSTGRRIKCLTVADDFSHECVS-ISVDWGISG 116

Query: 154 QDVQDLVITAVENRFGRINMLSEPIEWLTDNGSCFIAKDTASLLRDIGMEPCTTPVRSPQ 213
           Q V  L+  A   R         P+   TDNG  F ++      +  G+         P 
Sbjct: 117 QYVTRLLDQAAVFR-------GYPLAVRTDNGPEFTSRAFMGWAQTHGIRHILIEPGRPM 169

Query: 214 SNGMAEAFVKTFKRDYVAVNPTPDAETVMAQLPFWFEHYNNLHPHSALGYQSPREFISSQ 273
            NG  E+F   F+ + +            + +  W + YN + PHS+ G   P +F    
Sbjct: 170 QNGYIESFNGKFRDECLNEQWFETLMQARSAITAWRQDYNEVRPHSSCGRMPPAKFAEQH 229

Query: 274 SQ 275
            Q
Sbjct: 230 RQ 231