Pairwise Alignments

Query, 276 a.a., transposase ISRM1 from Sinorhizobium meliloti 1021

Subject, 271 a.a., Mobile element protein from Variovorax sp. SCN45

 Score = 67.8 bits (164), Expect = 2e-16
 Identities = 62/262 (23%), Positives = 110/262 (41%), Gaps = 28/262 (10%)

Query: 11  ARSNIAARAAGSPSRARGRP------PLPDRELVEDIKAVIADMPTYGYRRVHAILRRNA 64
           AR     RA G    +R  P      P  D  ++  +K + A  P YGYRR+   LRR  
Sbjct: 16  ARGLSLRRACGLIGMSRATPSYELRLPAKDAPVLAAMKELSAQYPRYGYRRIRVFLRRKG 75

Query: 65  RKLGRSWPNAKRVYRVMKLHNLLLVR-----HTGAVDNRLHEGQVAVERSNIRWCSDGFE 119
            +L  SW    R +R+ +   LL+ R        +V  R+H       ++N+ W  D   
Sbjct: 76  FEL--SW---SRTHRLWRQAGLLVPRKRPRKRIASVRPRVH----TPFKANMVWAYDFVF 126

Query: 120 IGCDNKEKVRVAFALDCCDREAIAHVATTEGIKSQDVQDLVITAVENRFGRINMLSEPIE 179
               + ++++    +D   RE +A +     I+S+ V +++   V       ++   P+ 
Sbjct: 127 DTTASGQQIKCLTVVDEYTRECLA-IDVAGAIRSKRVIEVLSRLV-------SLHGAPLF 178

Query: 180 WLTDNGSCFIAKDTASLLRDIGMEPCTTPVRSPQSNGMAEAFVKTFKRDYVAVNPTPDAE 239
             +DNG+ F+++     +   G+         P  NG  E+F   F+ + +++       
Sbjct: 179 MRSDNGTEFVSQAILEWISGAGIATVLNDPGKPWQNGTDESFNGKFRDECLSIEWFRSRR 238

Query: 240 TVMAQLPFWFEHYNNLHPHSAL 261
                +  W  HYN + PHS+L
Sbjct: 239 EAAVLIEAWRNHYNEVRPHSSL 260