Pairwise Alignments

Query, 276 a.a., transposase ISRM1 from Sinorhizobium meliloti 1021

Subject, 260 a.a., Mobile element protein from Sphingobium sp. HT1-2

 Score = 57.0 bits (136), Expect = 4e-13
 Identities = 61/238 (25%), Positives = 91/238 (38%), Gaps = 17/238 (7%)

Query: 41  IKAVIADMPTYGYRRVHAILRRNARKLGRSWPNAKRVYRVM--KLHNLLLVRHTGAVDNR 98
           I+ + A    YGYRR+H +LRR   K+        R+YR M  +L N    R   A   +
Sbjct: 33  IRELAATRVRYGYRRIHVLLRREGWKINHQ--RTLRLYREMGLQLRNKTPKRKVKA---K 87

Query: 99  LHEGQVAVERSNIRWCSDGFEIGCDNKEKVRVAFALDCCDREAIAHVATTEGIKSQDVQD 158
           L + +      N  W  D       +  K+RV   +D   R +           +  VQ 
Sbjct: 88  LRDDRAPASAPNECWSMDFLSDQLFDGRKIRVLSIIDNFSRVSPVLDVRMSYRGADVVQT 147

Query: 159 LV-ITAVENRFGRINMLSEPIEWLTDNGSCFIAKDTASLLRDIGMEPCTTPVRSPQSNGM 217
           L  + A   R  RI +         DNG  FI+KD        G+    +    P  N  
Sbjct: 148 LERVAATHGRPQRIRL---------DNGPEFISKDLDLWSWTHGVVLDFSRPGKPTDNAF 198

Query: 218 AEAFVKTFKRDYVAVNPTPDAETVMAQLPFWFEHYNNLHPHSALGYQSPREFISSQSQ 275
           AE+F +  + + +        +    +   W   YN + PHS+LG Q+P E      Q
Sbjct: 199 AESFNRRVRAECLNAFWFLSLDDARVKCEAWRIDYNEVRPHSSLGNQTPVEHAFGSGQ 256