Pairwise Alignments

Query, 276 a.a., transposase ISRM1 from Sinorhizobium meliloti 1021

Subject, 274 a.a., IS426 transposase from Agrobacterium fabrum C58

 Score =  249 bits (636), Expect = 5e-71
 Identities = 133/278 (47%), Positives = 176/278 (63%), Gaps = 9/278 (3%)

Query: 1   MKSVCETLGVARSNIAARAAGSPSRARGRPPL---PDRELVEDIKAVIADMPTYGYRRVH 57
           MK+V +TLGV+RSN+  R  G   R++ R P     D EL+  I+ ++   PTYGYRR+ 
Sbjct: 1   MKAVADTLGVSRSNLIERLKG---RSKPRGPYNKAEDAELLPAIRRLVDQRPTYGYRRIA 57

Query: 58  AILRRNARKLGRSWPNAKRVYRVMKLHNLLLVRHTGAVDNRLHEGQVAVERSNIRWCSDG 117
           A+L R  R   +   NAKRV+R+M  H +LL  HT     RLH+G+V V RSN+RWCSDG
Sbjct: 58  ALLNRERRAADQPVVNAKRVHRIMGNHAMLL-EHTAVRKGRLHDGKVMVMRSNLRWCSDG 116

Query: 118 FEIGCDNKEKVRVAFALDCCDREAIAHVATTE-GIKSQDVQDLVITAVENRFGRINMLSE 176
            E  C N E +R+AF +D  DRE IA  A    GI   DV+D+++ AVE RF        
Sbjct: 117 LEFACWNGEVIRLAFIIDAFDREIIAWTAVANAGISGSDVRDMMLEAVEKRF-HATRAPH 175

Query: 177 PIEWLTDNGSCFIAKDTASLLRDIGMEPCTTPVRSPQSNGMAEAFVKTFKRDYVAVNPTP 236
            IE L+DNGS + A+DT    + + + PC TPV SPQSNGM+EAFVKT KRDY+ ++  P
Sbjct: 176 AIEHLSDNGSAYTARDTRLFAQALNLTPCFTPVASPQSNGMSEAFVKTLKRDYIRISALP 235

Query: 237 DAETVMAQLPFWFEHYNNLHPHSALGYQSPREFISSQS 274
           DA+T +  +  W E YN +HPHSAL   SPR+FI ++S
Sbjct: 236 DAQTALRLIDGWIEDYNEIHPHSALKMASPRQFIRAKS 273