Pairwise Alignments

Query, 712 a.a., polysaccharide transporter from Sinorhizobium meliloti 1021

Subject, 663 a.a., LPS biosynthesis protein from Pseudomonas fluorescens SBW25

 Score = 68.2 bits (165), Expect = 1e-15
 Identities = 95/437 (21%), Positives = 170/437 (38%), Gaps = 49/437 (11%)

Query: 140 PEERVLKEFEEKLQVYQVEKSRVIAIAFTSKDATLAAAIPNEMANVYLSLQSGAKLDSNS 199
           P ER+    E+  +V     S V+ I+F   D  +A A+  +    Y++ ++ A      
Sbjct: 146 PVERLAAGLEKNFEVSHAAGSTVMDISFKWGDPEIAQAVVKDWVETYINERTQAL--GRK 203

Query: 200 EASRWLEPEIANLREKVREAEAKVALYRAESGLLPAGETQNFATRQLTDISTELARVRSE 259
               + E + AN   +++  + ++ ++  E G           T +L D+S  +  +R E
Sbjct: 204 SLYAFYEGQAANSATEIKSYKQQILIHLNEIGAAS-------ITDRLEDLSERINVLRGE 256

Query: 260 RANTAARAEGMRTALAD------GRPAD--TLADIVGSPMIQRLKENHANVQAQIADLST 311
             NT        +A+        G+P +  T+  I  +P  Q L+        + AD+  
Sbjct: 257 TFNTTRLIASSDSAIQSTRSQLKGQPKEVTTVRQIALNPQQQDLRRLLNQKLLEKADMMR 316

Query: 312 ALLDGHPRLKGLKSQLEGIEGAIRSETRKILAS---------------LENEAKVGQLRE 356
              D  P +K L + +  ++  + +E+  + AS               L +E    Q   
Sbjct: 317 TYTDNAPPVKALDASIRAMQVQVANESNTVQASENRAPNTLEIHLQRVLLDETSNNQALR 376

Query: 357 QQLVQQMN---TLKAQSAQAGEEEVGLRALEREATAQRQLLETYLARYREA-TSRTVANA 412
            QL+QQ      L+ Q  QA E E  L  L RE     +    Y+    ++   R + N+
Sbjct: 377 TQLIQQQKQLLNLEEQRKQALEIEPELARLSRELNTTERNYALYVDNLEKSRIDRELDNS 436

Query: 413 TPADARVISRAVVPTSQSFPKVLPITIVAAFASLLFSCVVIMLGELFSGRALRPVSVPEA 472
             ++  VI  A +   + FPK L +  +A   +++   +VI L  L   R      V   
Sbjct: 437 QISNIAVIEEATLNPGRIFPKTLVMLFLAIPFAIVVGLLVIYLCYLLDQRIHDGGLVERK 496

Query: 473 PAPGQPAEMPSVPGAVEENP----ASV-----LAAADPAPEENGDDGNAASKH----DFS 519
                   +P +     ++     AS+     L   D   EE    G  +++H     F 
Sbjct: 497 FGLPLWTTLPELDTTTAQSANAFNASIYRLYSLLQPDRIAEEGLVLGLTSARHGEGVTFV 556

Query: 520 IESVAEHLRANGVRIAV 536
           +E + + LR NGV + V
Sbjct: 557 VEQLRQLLRENGVNVRV 573