Pairwise Alignments

Query, 454 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 306 a.a., L,D-transpeptidase from Escherichia coli ECOR38

 Score = 70.5 bits (171), Expect = 7e-17
 Identities = 57/191 (29%), Positives = 89/191 (46%), Gaps = 14/191 (7%)

Query: 273 TSVTEMLGEKFHMDEAYLRELNPGVDFSIP--GTTIKV----VNPGPNKKGKVARIVADK 326
           T   E    ++ M  + + E NPGVD  +P  GT + +    + P    +G    IV + 
Sbjct: 50  TQPLEYFAAEYQMGLSNMMEANPGVDTFLPKGGTVLNIPQQLILPDTVHEG----IVINS 105

Query: 327 ARKQVLAYDEAGKLIAAYPSTIGSSDTPSP-SGTVHVERIAFDPGYTYNPKINFQ-QGAN 384
           A  ++  Y +    +   P  IG     +P + T  VER    P +T   K++ + + A 
Sbjct: 106 AEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAEYRAAG 165

Query: 385 DRILQLQP-GPNGPVGTVWIALSKPTYGIHGTPEPSKIGKTQSHGCVRLTNWDATELGKM 443
           + +  + P GP+ P+G   + + +  Y IHGT     IG   SHGCVRL N D   L + 
Sbjct: 166 EPLPAVVPAGPDNPMGLYALYIGR-LYAIHGTNANFGIGLRVSHGCVRLRNEDIKFLFEK 224

Query: 444 VSTGVTVEFVD 454
           V  G  V+F+D
Sbjct: 225 VPVGTRVQFID 235