Pairwise Alignments

Query, 184 a.a., RNA polymerase sigma factor from Sinorhizobium meliloti 1021

Subject, 184 a.a., RNA polymerase sigma factor protein from Sinorhizobium meliloti 1021

 Score = 85.9 bits (211), Expect = 4e-22
 Identities = 50/156 (32%), Positives = 87/156 (55%), Gaps = 6/156 (3%)

Query: 8   FKREMLAALPSLRAFAMSLIGRHDRADDLVQDTIMKAWAKQDHFEIGTNMKAWLFTILRN 67
           F+ E+L  +P+LR ++ SL       +DL+QD + K  A+++ +  G N++AW FTI+ N
Sbjct: 22  FEEEVLELMPALRRYSRSLAHSDPDGEDLLQDCVEKVLARREQWR-GVNLRAWAFTIMTN 80

Query: 68  ELYSQMRKRGREVQDSDGHLTETLAHHPEQYGS--LDLQDFRRALEQLPPDQREAIILVG 125
              +  R+R    Q  +    E L    E+  +  L+ Q   R LE+L  D R  ++LV 
Sbjct: 81  LFRNGHRRRA---QHPEVEFDEALGLRAEEDNADPLERQRLMRGLERLSADNRAVLMLVV 137

Query: 126 ASGFSYEEAATICGCALGTIKSRVNRARQRLQEILQ 161
             G+ Y++ A +    +GT+ SR++RAR++L E ++
Sbjct: 138 IEGYRYQDVADMMEIPIGTVMSRLSRARRQLAEAMK 173