Pairwise Alignments

Query, 184 a.a., RNA polymerase sigma factor from Sinorhizobium meliloti 1021

Subject, 197 a.a., RNA polymerase subunit sigma from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  100 bits (250), Expect = 1e-26
 Identities = 64/174 (36%), Positives = 91/174 (52%), Gaps = 16/174 (9%)

Query: 4   ENQEFKREMLAALPSLRAFAMSLIGRHDRADDLVQDTIMKAWAKQDHFEIGTNMKAWLFT 63
           ++  F+ E+L  L  L  FA  L    D A+DLVQ+T +KA+   D+FE GTN KAWLF 
Sbjct: 14  KDARFEAELLPVLDPLYNFAYRLTLDEDDANDLVQETYLKAYRFFDYFEQGTNAKAWLFR 73

Query: 64  ILRNELYSQMRKRGRE--------------VQDSDGH--LTETLAHHPEQYGSLDLQDFR 107
           IL+N   ++ RK+ ++               +D +G   +  T     E    L   +  
Sbjct: 74  ILKNSFINEFRKKSKQPAKVDYSEVEGYYNSEDVEGESGVASTTDMRTESVQDLIGDEVA 133

Query: 108 RALEQLPPDQREAIILVGASGFSYEEAATICGCALGTIKSRVNRARQRLQEILQ 161
            AL  LP D R  IIL    GF+YEE A I    +GT++SR++RAR  L+E L+
Sbjct: 134 SALNALPVDFRTVIILCDLEGFTYEEMAKILDIPIGTVRSRLHRARNSLKEKLE 187