Pairwise Alignments

Query, 398 a.a., transporter from Sinorhizobium meliloti 1021

Subject, 433 a.a., secretion protein HlyD from Pseudomonas simiae WCS417

 Score =  110 bits (276), Expect = 6e-29
 Identities = 112/429 (26%), Positives = 186/429 (43%), Gaps = 61/429 (14%)

Query: 11  VVVLAVGGAAWVRLAPGAGETLAAIGVSQPLIDALSGPQGGEGARGGSGDSERGQGRRSG 70
           +V+L + G  W +  PG+ +                G +   G  G +G    G G  +G
Sbjct: 21  LVLLVIAGLCW-KFWPGSHK---------------DGAEKPAGHAGKTGMMRPGFGGSTG 64

Query: 71  FAEAPLVV-VKPAERAVVNDRLNAIGNGEAIRSVTVTPTATGNLTEILVKSGDRITEGQV 129
               P+ V V PA          A+G   A+ ++ V     G L +I  + G  +  G +
Sbjct: 65  ----PVPVRVAPAVLGEFPVYYKALGTVTALNTINVRSRVGGELVKIAFEEGQMVKAGDL 120

Query: 130 IARLDSDDQMIAAEQARLTR-------DSAREKVERYRNLSTARAVTAVEVRDSEIALQA 182
           +A +D      A  QA+ T         +A+  V+RYR+L    ++    +  +E  +  
Sbjct: 121 LAEIDPRSYQNALLQAQGTLMQNQAQLKNAQVDVQRYRDLYAQDSIAKQTLDTAEALVLQ 180

Query: 183 AELALKT-------AELDLKRRDIVAPSKGVVGIITVNIGDYVTTS--TPIAVVDDRSQI 233
            +  +KT       A+L+L+   I AP  G VG+  V++G+ V  +  T +AV+     I
Sbjct: 181 YQGTVKTNQGAVDDAKLNLEFTKIRAPISGRVGLRQVDVGNLVAANDTTFLAVITQTQPI 240

Query: 234 LVDFWVPERFAGKISVDQ------PVTASAIAQPGRALQGVVHAIDNRLDPESRTLRVRA 287
            V F +PE     +          PV A       +   GV+ ++DN++D  + TL+ +A
Sbjct: 241 SVAFTLPENTLETVLTRYHAGNKLPVEAWDRGDVKQQAVGVLQSLDNQIDVTTGTLKFKA 300

Query: 288 RLENPDDMLRAGMSFSVTVAFDGDRYPTVDP-LAIQWSSEGSFIWRVKGDKSERV-PIKI 345
           R +N D  L      +V +  D      + P  AIQ+ + G+F++ + GDK  +V P+ +
Sbjct: 301 RFDNKDQALFPNQFVNVHLLADTLHNVVLAPSAAIQFGNTGTFVYVLDGDKKVKVQPLVV 360

Query: 346 IQRNPDKVLVDAELAEGDRVVTEGVQRLRDGGVVRIA---------------GEPAAEAE 390
              + D  ++   L  GDRVV EG  RL+DG  + +                G+PAA+ E
Sbjct: 361 GDTDGDNTVIKEGLKAGDRVVLEGTDRLKDGSEIEVVNDSSEVPTTPTEHLQGKPAAKGE 420

Query: 391 Q-KVAGDAQ 398
               AG AQ
Sbjct: 421 TGTTAGKAQ 429