Pairwise Alignments

Query, 398 a.a., transporter from Sinorhizobium meliloti 1021

Subject, 377 a.a., Probable Co/Zn/Cd efflux system membrane fusion protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  144 bits (362), Expect = 6e-39
 Identities = 119/390 (30%), Positives = 179/390 (45%), Gaps = 31/390 (7%)

Query: 8   AISVVVLAVGGAAWVRLAPGAGETLAAIGVSQPLIDALSGPQGGEGARGGSGDSERGQGR 67
           A+ VVV  VG    + LA GA   L          D  + P  G G   G G +  G   
Sbjct: 5   ALYVVVAVVG----IGLASGAAWWLQNR-------DKAAAPVAGTGTGAGPGAAGGG--- 50

Query: 68  RSGFAEAPLVVVKPAERAVVNDRLNAIGNGEAIRSVTVTPTATGNLTEILVKSGDRITEG 127
                 AP V V   +   + D   A+G   + +SVT+ P  +G +  I+   G R+  G
Sbjct: 51  ------APGVEVTRVKTIRLQDDAQAVGTLRSRQSVTLKPETSGRVARIVFADGARVKAG 104

Query: 128 QVIARLDSDDQMIAAEQARLTRDSAREKVERYRNLSTARAVTAVEVRDSEIALQAAELAL 187
           Q++ +LD   Q     QA+     AR  ++R + L     V    V +S+  LQ AE  +
Sbjct: 105 QLLVQLDDTLQRAELSQAQAQLSIARANLKRNQELVAQNFVAQRVVEESQANLQVAEAQV 164

Query: 188 KTAELDLKRRDIVAPSKGVVGIITVNIGDYVTTSTPIAVVDDRSQILVDFWVPERFAGKI 247
             A+  L+R  I AP  G VG+ ++N+G YV     +  ++D S + VDF +PER+  ++
Sbjct: 165 ALADARLQRMRITAPFAGTVGLRSINLGAYVKDGDSLVNLEDTSMLTVDFRLPERYQSQL 224

Query: 248 SVDQPVTASAIAQPGRALQGVVHAIDNRLDPESRTLRVRARL-ENPDDMLRAGMSFSVTV 306
           +  Q V     A P R  +  V A+D  LD   R++ VRA +    D++LR GM   V +
Sbjct: 225 APGQVVQVQLDALPNRPFEAKVLAVDPLLDANGRSISVRAVMPPAADNVLRPGMFARVLI 284

Query: 307 AFDGDRYPTVDP---LAIQWSSEGSFIWRVKGD------KSERVPIKIIQRNPDKVLVDA 357
            F  +    V P   L  Q   + +++   +G+       S RV + +  R   +V V +
Sbjct: 285 VFSVNERALVVPEEALVPQAGKQYAYVLDEQGEGDAKKRLSRRVEVALGARRGSEVEVVS 344

Query: 358 ELAEGDRVVTEGVQRL-RDGGVVRIAGEPA 386
            L +GD VV  G QRL RDG  VR+    A
Sbjct: 345 GLQQGDAVVIAGQQRLQRDGTAVRVVNMAA 374