Pairwise Alignments

Query, 398 a.a., transporter from Sinorhizobium meliloti 1021

Subject, 413 a.a., Multidrug transporter MdtA from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  125 bits (314), Expect = 2e-33
 Identities = 93/351 (26%), Positives = 171/351 (48%), Gaps = 26/351 (7%)

Query: 68  RSGFAEAPLVVVKPAERAV--VNDRLNAIGNGEAIRSVTVTPTATGNLTEILVKSGDRIT 125
           R G  + PL  V+ A      V   L+ +G   A  +VTV     G L  +  + G ++ 
Sbjct: 50  RRGMRDGPLAPVQAATATTQAVPRYLSGLGTVTAANTVTVRSRVDGQLIALHFQEGQQVN 109

Query: 126 EGQVIARLDSDDQMIAAEQAR--LTRDSA-----REKVERYRNLSTARAVTAVE------ 172
            G ++A++D     +A  QA+  L +D+A     R  + RY+ L+    V+  E      
Sbjct: 110 AGDLLAQIDPSQFKVALAQAQGQLAKDNATLANARRDLARYQQLAKTNLVSRQELDAQQA 169

Query: 173 -VRDSEIALQAAELALKTAELDLKRRDIVAPSKGVVGIITVNIGDYVTTSTP--IAVVDD 229
            V +++  ++A E  + +A+L L    I AP  G VG+  V++G+ +++S    I V+  
Sbjct: 170 LVNETQGTIKADEANVASAQLQLDWSRITAPVSGRVGLKQVDVGNQISSSDTAGIVVITQ 229

Query: 230 RSQILVDFWVPERFAGKISVDQPVTASAIAQPG------RALQGVVHAIDNRLDPESRTL 283
              I + F +PE     +   Q    + + +        +  +GV+ ++DN++DP + T+
Sbjct: 230 THPIDLIFTLPESDIATVVQAQKAGKALVVEAWDRTNSHKLSEGVLLSLDNQIDPTTGTI 289

Query: 284 RVRARLENPDDMLRAGMSFSVTVAFDGDRYPTVDP-LAIQWSSEGSFIWRVKGDKS-ERV 341
           +++AR  N DD L      +  +  D ++   V P  A+Q  +EG F+W +  + +  + 
Sbjct: 290 KIKARFTNQDDTLFPNQFVNARMLVDTEQNAVVVPAAAVQMGNEGHFVWVLNDENNVSKK 349

Query: 342 PIKIIQRNPDKVLVDAELAEGDRVVTEGVQRLRDGGVVRIAGEPAAEAEQK 392
            +KI  ++   V++ A L+ GDRVVT+G+ RL +G  V +       A++K
Sbjct: 350 RVKIGIQDNRNVVISAGLSAGDRVVTDGIDRLTEGAKVEVVEPQTTVADEK 400