Pairwise Alignments

Query, 309 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 370 a.a., class II histone deacetylase from Pseudomonas fluorescens SBW25

 Score =  170 bits (431), Expect = 4e-47
 Identities = 108/296 (36%), Positives = 150/296 (50%), Gaps = 7/296 (2%)

Query: 19  GHPERPDRLKALNLALEHPNFAD-LERLEASKGDENLVLLAHTEEHLLGIKRDIPDEDIN 77
           GH E P+  + +   L+    +  L+   A+   E  +L  H  E+L   K  + D    
Sbjct: 38  GHAESPETKRRMKSLLDVSGLSHHLDIHNAAVASETDLLRVHGREYLQRFKA-LSDAGGG 96

Query: 78  QIESDTYASPQSLEAALTGIGGAVAAVDAVFAGEADNAFVAARPPGHHAEKNRAMGFCFF 137
           ++       P S E A    G  +AAVD V  G ADNA+  +RPPGHH   + AMGFCF 
Sbjct: 97  ELGPQAPIGPGSYEIARLSAGLTMAAVDTVLKGLADNAYSLSRPPGHHCLADSAMGFCFL 156

Query: 138 NNVAIAARYAQTAHGAERVAIVDWDVHHGNGTQDIFWDDPSVLFCSTHQIPLY-PGTGAK 196
            N+AIA   A+   G  +VA++DWDVHHGNGTQ IF     VL  S HQ   Y PG   +
Sbjct: 157 ANIAIAIEAAKARSGLGKVAVIDWDVHHGNGTQAIFEARADVLTISLHQDGCYPPGYSGE 216

Query: 197 DETG---VRNNVVNAPISPNSGSEHFRDAFRSRVLPALENFRPDFLLISAGFDAHHRDPL 253
            + G    R   +N P+ P  G + +  A    V+PALE F+P+ ++++ GFDA+  DPL
Sbjct: 217 QDRGRGAGRGANINIPLPPGCGHDAYLHAMTRIVVPALERFQPELIIVACGFDANAVDPL 276

Query: 254 AQINLVGEDFDWATGRLLDVAGRSAGNRIVSLLEGGYDLQGLAESAGLHILRLMRG 309
           A++ L  E F   T  +   A R    R+V + EGGY  +      GL  L  + G
Sbjct: 277 ARMLLHSESFRLMTRCVRQAAERLCQGRLVLVHEGGYS-EAYVPFCGLATLEELSG 331