Pairwise Alignments

Query, 485 a.a., transporter transmembrane protein from Sinorhizobium meliloti 1021

Subject, 484 a.a., putative transport protein (VIMSS) from Escherichia coli BW25113

 Score =  196 bits (497), Expect = 2e-54
 Identities = 137/475 (28%), Positives = 235/475 (49%), Gaps = 21/475 (4%)

Query: 12  YNEDLAPA--KERNWGAFSIFNVWTSDVHSLWGYYLAASLFLFCGSFMNFLLAIGIGSLI 69
           Y+EDL P    +R W  F+ F +W   VH++  Y +    F+   S  + +LAI + +  
Sbjct: 13  YSEDLLPKTQSQRTWKTFNYFTLWMGSVHNVPNYVMVGGFFILGLSTFSIMLAIILSAFF 72

Query: 70  IFFLMQLVGVAGVRTGVPFPVLARASFGIWGANFPAIVR-AIVACFWYGAQTAAASGAIV 128
           I  +M L G AG + GVPF ++ RAS+G+ GA FP ++R  I A  W+G Q  A S A +
Sbjct: 73  IAAVMVLNGAAGSKYGVPFAMILRASYGVRGALFPGLLRGGIAAIMWFGLQCYAGSLACL 132

Query: 129 ALLVRN-ESLLQFHQSSHMLGHSTLELVCYVVVWGLQLLIIQNGMETVRKFQDWAGPAVW 187
            L+ +     L       +LG S   L+ +++ W + + I   G + + KF     P ++
Sbjct: 133 ILIGKIWPGFLTLGGDFTLLGLSLPGLITFLIFWLVNVGIGFGGGKVLNKFTAILNPCIY 192

Query: 188 VMMLLLAIYLVVKAGGFSFSHTIPMDALLEKTKNAGVPGVPGSFAALGAVAAIWVTYFSA 247
           ++   +AI+ +   G       IP    ++K +N G          + AV A+W    +A
Sbjct: 193 IVFGGMAIWAISLVGIGPIFDYIPSG--IQKAENGGFL----FLVVINAVVAVW----AA 242

Query: 248 LYLNFCDFSRYCPSERSLKVGNLWGLPVNLILFSLVAGVTTIAAFNV-YGEVLLHPDQIS 306
             ++  DF++   S R   +G   GL V  ILF+ VAGV  IA  ++ YG    +   I 
Sbjct: 243 PAVSASDFTQNAHSFREQALGQTLGLVVAYILFA-VAGVCIIAGASIHYGADTWNVLDIV 301

Query: 307 AKFDSWFLALLAALTFAVATLGINVVANFVSPAFDFANVFPKHIDFKKGGYIAALIALAL 366
            ++DS F +  A L   + T+  N   N +   +  A + P  + +K G  IA++I+L +
Sbjct: 302 QRWDSLFASFFAVLVILMTTISTNATGNIIPAGYQIAAIAPTKLTYKNGVLIASIISLLI 361

Query: 367 YPFAPWEG--GAAHFVNMIGNTMGPIFGVMMVDYYLIRKGRVDVEALYREDGEFR-FENG 423
            P+   E       F+++IG  +GP+ GVMM  Y+++ +G+++++ LY   G+++ ++NG
Sbjct: 362 CPWKLMENQDSIYLFLDIIGGMLGPVIGVMMAHYFVVMRGQINLDELYTAPGDYKYYDNG 421

Query: 424 WHVNALVAAGIGIVFSSILPGLTSVMPAWWGVYGWFFGVAIAGAIYYALRSFKSA 478
           +++ A     + ++ S  L G             WF GV +A A Y  L+   +A
Sbjct: 422 FNLTAFSVTLVAVILS--LGGKFIHFMEPLSRVSWFVGVIVAFAAYALLKKRTTA 474