Pairwise Alignments

Query, 573 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 291 a.a., 23S rRNA pseudouridylate synthase (NCBI) from Escherichia coli BW25113

 Score =  146 bits (369), Expect = 9e-40
 Identities = 95/237 (40%), Positives = 132/237 (55%), Gaps = 21/237 (8%)

Query: 47  QRISKILSRAGVASRRDVERMIMEGRVSLNGVVLDTPVVNATLADRIEV--------DGH 98
           +++ K+L+RAG  SRR++E +I  GRVS++G +       A L DR+EV        DGH
Sbjct: 3   EKLQKVLARAGHGSRREIESIIEAGRVSVDGKI-------AKLGDRVEVTPGLKIRIDGH 55

Query: 99  PIRGIERT----RLWLYHKPGGLVTTNADPEGRPTVFENLPE-ELPRVLSVGRLDINTEG 153
            I   E      R+  Y+KP G + T  DPEGRPTVF+ LP+    R ++VGRLD+NT G
Sbjct: 56  LISVRESAEQICRVLAYYKPEGELCTRNDPEGRPTVFDRLPKLRGARWIAVGRLDVNTCG 115

Query: 154 LLLLTNDGGLARVLELPSTGWLRRYRVRAHGEIDQEALDRLKEGIAVDGVLYGAIEATLD 213
           LLL T DG LA  L  PS    R Y VR  G++D   L  L  G+ ++            
Sbjct: 116 LLLFTTDGELANRLMHPSREVEREYAVRVFGQVDDAKLRDLSRGVQLEDGPAAFKTIKFS 175

Query: 214 RVQGSNVWITMGLREGKNREIKNVLGALGLDVNRLIRISYGPFQLGE-LPIGQVQEI 269
             +G N W  + L EG+NRE++ +  A+G+ V+RLIR+ YG   L + LP G   E+
Sbjct: 176 GGEGINQWYNVTLTEGRNREVRRLWEAVGVQVSRLIRVRYGDIPLPKGLPRGGWTEL 232