Pairwise Alignments

Query, 398 a.a., tRNA-specific 2-thiouridylase MnmA from Sinorhizobium meliloti 1021

Subject, 374 a.a., tRNA 2-thiouridylase from Pseudomonas simiae WCS417

 Score =  218 bits (555), Expect = 2e-61
 Identities = 141/384 (36%), Positives = 197/384 (51%), Gaps = 29/384 (7%)

Query: 7   DRKPEDT---RVVVAMSGGVDSSVVAGLLKREGYDVLGITLQLYDHGAAVHRAGSCCAGQ 63
           D  P DT   RV+V MSGGVDSSV A LL  +GY+V G+ ++ ++          C A  
Sbjct: 3   DPAPSDTQKKRVIVGMSGGVDSSVSAVLLMEQGYEVEGLFMKNWEEDDGTEY---CTAMD 59

Query: 64  DIDDARRVCETIGIPHYVLDYEARFRETVINPFAESYIAGETPIPCVACNQTVKFADLLA 123
           D+ DA+ VC+ IGI  +  ++ A + + V   F   Y AG TP P + CN+ +KF   L 
Sbjct: 60  DLADAQAVCDKIGIKLHTANFAAEYWDNVFEHFLAEYKAGRTPNPDILCNREIKFKAFLD 119

Query: 124 TAKELGADALATGHYIRSRPSPKPRYAGQRALYRPADAERDQSYFLFATTQEQIDYLRFP 183
            A  LGAD +ATGHY+R R        G+  L +  D  +DQSYFL A   EQI    FP
Sbjct: 120 YAMMLGADLIATGHYVRRRD-----IDGRTELLKGLDPNKDQSYFLHAVGGEQIAKTLFP 174

Query: 184 LGGLPKSETRALAEEMGLVVAKKADSQDICFVPQGKYSDIVSKLKPNAALAGEIVHLDGR 243
           +G L K E R +AE+ GL  AKK DS  ICF+ + ++SD + +  P  A  GEI   +G 
Sbjct: 175 VGELEKPEVRRIAEKHGLATAKKKDSTGICFIGERRFSDFLKQYLP--AQPGEIKTTEGE 232

Query: 244 VLGAHEGILHYTIGQRRGIGV-----ATGEPLYVVYLDSRSRRVIVG---PKEALETRRV 295
           V+G H G++++TIGQR+G+G+     A  EP YV+  D     +IVG       L +  +
Sbjct: 233 VIGRHHGLMYHTIGQRQGLGIGGLKDAGEEPWYVLIKDLEHNELIVGQGNEHPLLFSGAL 292

Query: 296 YLRDVNWLGDEELEAAAGQGFECFAKVRSTRRPAPAVLKSDAEGLYVELVEGEAGVAPGQ 355
              ++ W+   +L           AKVR  +   P  L+  A G      + +  V PGQ
Sbjct: 293 LASEIYWVNPIDLSTPR----RLTAKVRYRQSDQPCTLEKTATGYRAIFDDPQRAVTPGQ 348

Query: 356 ACALYSGTGEDARVYGGGFIRRSE 379
           +   Y G        GGG I  +E
Sbjct: 349 SVVFYDG----EICLGGGVIEVAE 368