Pairwise Alignments

Query, 398 a.a., tRNA-specific 2-thiouridylase MnmA from Sinorhizobium meliloti 1021

Subject, 368 a.a., tRNA(Gln,Lys,Glu) U34 2-thiouridylase from Escherichia coli BL21

 Score =  214 bits (544), Expect = 4e-60
 Identities = 130/374 (34%), Positives = 204/374 (54%), Gaps = 28/374 (7%)

Query: 14  RVVVAMSGGVDSSVVAGLLKREGYDVLGITLQLYDHGAAVHRAGSCCAGQDIDDARRVCE 73
           +V+V MSGGVDSSV A LL+++GY V G+ ++ ++          C A  D+ DA+ VC+
Sbjct: 7   KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEY---CTAAADLADAQAVCD 63

Query: 74  TIGIPHYVLDYEARFRETVINPFAESYIAGETPIPCVACNQTVKFADLLA-TAKELGADA 132
            +GI  + +++ A + + V   F   Y AG TP P + CN+ +KF   L   A++LGAD 
Sbjct: 64  KLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADY 123

Query: 133 LATGHYIRSRPSPKPRYAGQRALYRPADAERDQSYFLFATTQEQIDYLRFPLGGLPKSET 192
           +ATGHY+R     +    G+  L R  D+ +DQSYFL+  + EQI    FP+G L K + 
Sbjct: 124 IATGHYVR-----RADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQV 178

Query: 193 RALAEEMGLVVAKKADSQDICFVPQGKYSDIVSKLKPNAALAGEIVHLDGRVLGAHEGIL 252
           R +AE++GLV AKK DS  ICF+ + K+ + + +  P  A  G+I+ +DG  +G H+G++
Sbjct: 179 RKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLP--AQPGKIITVDGDEIGEHQGLM 236

Query: 253 HYTIGQRRGIGV-----ATGEPLYVVYLDSRSRRVIVG---PKEALETRRVYLRDVNWLG 304
           ++T+GQR+G+G+      T EP YVV  D  +  ++V        L +  +  + ++W+ 
Sbjct: 237 YHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVD 296

Query: 305 DEELEAAAGQGFECFAKVRSTRRPAPAVLKS-DAEGLYVELVEGEAGVAPGQACALYSGT 363
            E           C  K R  +   P  +K+ D + + V   E  A V PGQ+   Y+G 
Sbjct: 297 REPFTGT----MRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNG- 351

Query: 364 GEDARVYGGGFIRR 377
                  GGG I +
Sbjct: 352 ---EVCLGGGIIEQ 362