Pairwise Alignments

Query, 383 a.a., ribonuclease D protein from Sinorhizobium meliloti 1021

Subject, 377 a.a., ribonuclease D from Pseudomonas simiae WCS417

 Score =  192 bits (487), Expect = 2e-53
 Identities = 112/354 (31%), Positives = 199/354 (56%), Gaps = 9/354 (2%)

Query: 12  CRELARSSYITIDTEFLRETTFWPVLCLIQMASPEMAVIVDPMAPGIDLAPFFALMSNPD 71
           C E  +  ++ +DTEF+R  TF+P+  LIQ+     A ++DP+    +  P  AL+ NP 
Sbjct: 18  CAEWQQLPFVALDTEFMRVDTFYPIAGLIQIGDGVSAYLIDPLTID-NWQPLAALLENPA 76

Query: 72  VVKVFHAARQDIEIIHHLGNLIPHPIFDTQVAAMVCGFGDSVSYDQLVNRIKNEQIDKSS 131
           V+KV HA  +D+E++  L   +P P+FDTQ+AA     G S+ Y +LV  + + ++ K  
Sbjct: 77  VIKVVHACSEDLEVLLRLTGSLPVPLFDTQLAAAYLNLGFSMGYSRLVQAVLDIELPKGE 136

Query: 132 RFTDWSRRPLTDKQLDYALADVTHLRDIYQYLTKELDREGRSSWLAEEMAILESRETYDL 191
             +DW +RPL++ Q+ YA  D  HL ++Y  L  +L  + + +W+ E+ A L +    ++
Sbjct: 137 TRSDWLQRPLSETQVSYAAEDAVHLAEVYTRLRPQLS-DDKYAWVLEDGAELVANLRREV 195

Query: 192 HPDNAWQRLKMRVK-KPIELAVLQKVAAWREREARARNVPRGRIIKDDAIYEIAQQQPKD 250
            P   ++  K+  K    +LAVL+++ AWRE++ARAR++PR RII++ +++ +A+ QP +
Sbjct: 196 DPYEVYRDAKLAWKLSRAQLAVLRELCAWREQQARARDLPRNRIIREHSLWPLAKSQPDN 255

Query: 251 AEALGRLRTIPKGWERSSAGTALIEAVGEALAIPRGELPRLPRQNHAPEGAAAASELLKV 310
             ALG++  +     R   G  L++ +  A ++P  + P    +   P  AAA  + L+ 
Sbjct: 256 LAALGKIEDMHPRTVRQD-GQFLLDLIKRAGSVPMDQWPPAVAE-PLPVDAAALIKQLRA 313

Query: 311 LLKLISEKEGVAAKIIANSDDLDRIAAEG--EGADVA--ALKGWRRELFGMTAL 360
           + +  +E+  +A +++     L+ +   G  +G      +L+GWRREL G   L
Sbjct: 314 IGQAEAERLEMAPELMLRKKTLEALVKSGYPDGPYQLPDSLRGWRRELMGQALL 367