Pairwise Alignments

Query, 847 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 318 a.a., Inner membrane protein YbhN from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score = 99.4 bits (246), Expect = 3e-25
 Identities = 82/307 (26%), Positives = 148/307 (48%), Gaps = 13/307 (4%)

Query: 19  WRLFLRRNQRYLSAIGTLLVIALFGAAIFHLTAEVRYDDVVSALADTSRRSVATAILFTG 78
           WRL  ++   +L  I  ++++ ++         +V +++V   + D +R ++ +A+    
Sbjct: 8   WRL-AKKILTWLFFIAVIVLLVVYAK-------KVDWEEVWKVIRDYNRVALLSAVGLVV 59

Query: 79  LSFLALTFYDVSALDYIERKLPYPAVALTAACAYAVGNTAGFGPLSGGAIRYRSYSRLGL 138
           +S+L    YD+ A  Y   KL    V L +   YA   T     + G  +RYR YSRLGL
Sbjct: 60  VSYLIYGCYDLLARFYCGHKLAKRQVMLVSFICYAFNLTLSTW-VGGIGMRYRLYSRLGL 118

Query: 139 KPEEIARLIAFVTLAFGLGLAVVTCLSLLAVGEYVAPLTGIDAAWLRAIAVFVLAGLLVV 198
               I R+ +       LG  ++  +   A    +     +D   LR + + +L  + V 
Sbjct: 119 PGSTITRIFSLSITTNWLGYILLAGIIFTAGVVELPDHWYVDQTTLRILGIGLLMIIAVY 178

Query: 199 L--IAARSGREVRIGRLVLRLPDSQTCSRQFLVTALDLAASATVLYVLLPAGTVGWPAFL 256
           L   A    R + I    L LP  +    Q L+++++      ++++LL   +V +   L
Sbjct: 179 LWFCAFAKHRHMTIKGQKLVLPSWKFALAQMLISSVNWMVMGAIIWLLL-GQSVNYFFVL 237

Query: 257 AIYAVAVGLGVLSHVPAGLGVFEAVIVASL-GRAAGVDAVLGALVLYRVIYHLLPLLIAI 315
            +  V+   GV+ H+PAG+GV EAV +A L G       ++ AL+ YRV+Y+ +PLL+A+
Sbjct: 238 GVLLVSSIAGVIVHIPAGIGVLEAVFIALLAGEHITKGTIIAALLAYRVLYYFIPLLLAL 297

Query: 316 VVMIGIE 322
           +  + +E
Sbjct: 298 ICYLLLE 304