Pairwise Alignments

Query, 885 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 548 a.a., medium-chain fatty-acid--CoA ligase from Escherichia coli ECRC98

 Score = 91.3 bits (225), Expect = 1e-22
 Identities = 109/356 (30%), Positives = 139/356 (39%), Gaps = 21/356 (5%)

Query: 118 AIAPH-PELAVLLSTSGSTGHGKWVRLSHMNIQSNARSIAEYLGLTAADRGCLILPLHYS 176
           AI  H  ELA +L TSG+ G  K V L+H NI ++ R+    L LT  D   +  PL ++
Sbjct: 182 AITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARLNLTWQDVFMMPAPLGHA 241

Query: 177 YG-LSVLNAHLAVGASVYMPGCSILDEGFLDELAQSASSNFAGVPYSYDLLEKAGFRARD 235
            G L  + A   +GA   +      D        Q  S      P+ YDLL     +  D
Sbjct: 242 TGFLHGVTAPFLIGARSVLLDIFTPDACLALLEQQRCSCMLGATPFVYDLLNLLEKQPAD 301

Query: 236 FPALRFMTVAGGRLAPELVRRYNEHLSARNARLFVMYGQTEATARMAYMPPDRLRGREDR 295
             ALRF  + GG   P+ V R       R  +L  +YG TE++        D L      
Sbjct: 302 LSALRFF-LCGGTTIPKKVAR---ECQQRGIKLLSVYGSTESSPHAVVNLDDPLSRFMHT 357

Query: 296 IGIAIPGGSLTIEDNDGRIISSADQPGELVYRGPNVMMGYASSRADLARGA-ELSELRTG 354
            G A  G  + + D D R        GE   RGPNV MGY       AR   E     +G
Sbjct: 358 DGYAAAGVEIKVVD-DARKTLPPGCEGEEASRGPNVFMGYFDEPELTARALDEEGWYYSG 416

Query: 355 DLAVRDADGVFRIVGRTKRISKIAGLRIGHDALEAALEQHGV---AAAVVGNDT---EIH 408
           DL   D  G  +I GR K I    G  I    +E  L QH     A  V   D    E  
Sbjct: 417 DLCRMDEAGYIKITGRKKDIIVRGGENISSREVEDILLQHPKIHDACVVAMPDERLGERS 476

Query: 409 AYYVGSGDPDEVRRLLVEASGLTLMHVGASR-------LDKLPRLTSGKIDYPALR 457
             YV    P     L    +  +   V   +       ++KLPR  SGKI    LR
Sbjct: 477 CAYVVLKAPHHSLSLEEVVAFFSRKRVAKYKYPEHIVVIEKLPRTASGKIQKFLLR 532