Pairwise Alignments

Query, 487 a.a., DNA repair protein RadA from Sinorhizobium meliloti 1021

Subject, 460 a.a., predicted repair protein (NCBI) from Escherichia coli BW25113

 Score =  372 bits (954), Expect = e-107
 Identities = 196/443 (44%), Positives = 283/443 (63%), Gaps = 24/443 (5%)

Query: 21  MAKA-RTQFVCQNCGTVHSRWVGKCDGCGEWNTIIEDNPTAGIGGGPMRTPKKGRPVALT 79
           MAKA +  FVC  CG  + RW G+C  C  WNTI E    A        +P   R   L+
Sbjct: 1   MAKAPKRAFVCNECGADYPRWQGQCSACHAWNTITEVRLAA--------SPMVARNERLS 52

Query: 80  TLSGE-------------IEDAPRIQTGISELDRVTGGGFVRGSALLVGGDPGIGKSTVL 126
             +G              +E+ PR  TG  E DRV GGG V GSA+L+GG+PG GKST+L
Sbjct: 53  GYAGSAGVAKVQKLSDISLEELPRFSTGFKEFDRVLGGGVVPGSAILIGGNPGAGKSTLL 112

Query: 127 MQAAAALARRKHRVIYVSGEEAIAQVRLRAQRLGAADSDVLLAAETNVEDILATLSEGKR 186
           +Q    LA++  + +YV+GEE++ QV +RA RLG    ++ + +ET++E I   ++E ++
Sbjct: 113 LQTLCKLAQQM-KTLYVTGEESLQQVAMRAHRLGLPTDNLNMLSETSIEQI-CLIAEEEQ 170

Query: 187 PDLVIIDSIQTLWSDIVDSAPGTVTQVRTGVQAMIRFAKQTGTAVVLVGHVTKEGQIAGP 246
           P L++IDSIQ +    V S+PG+V QVR     + RFAK  G A+V+VGHVTK+G +AGP
Sbjct: 171 PKLMVIDSIQVMHMADVQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGP 230

Query: 247 RVVEHMVDAVLYFEGDRGHHYRILRTVKNRFGPTDEIGVFEMSDKGLREVANPSELFLGE 306
           +V+EH +D  +  +GD    +R LR+ KNRFG  +E+GVF M+++GLREV+NPS +FL  
Sbjct: 231 KVLEHCIDCSVLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSR 290

Query: 307 RNAKSPGAAVFAGMEGTRPVLVEVQALVAPTSLGTPRRAVVGWDSARLSMILAVLEAHCG 366
            +  + G++V    EGTRP+LVE+QALV  + +  PRR  VG +  RL+++LAVL  H G
Sbjct: 291 GDEVTSGSSVMVVWEGTRPLLVEIQALVDHSMMANPRRVAVGLEQNRLAILLAVLHRHGG 350

Query: 367 IRLGQHDVYLNVAGGYRISEPAADLAVASALVSSLAGLALPPDCVYFGEVSLSGAVRPVA 426
           +++   DV++NV GG +++E +ADLA+  A+VSSL    LP D V FGEV L+G +RPV 
Sbjct: 351 LQMADQDVFVNVVGGVKVTETSADLALLLAMVSSLRDRPLPQDLVVFGEVGLAGEIRPVP 410

Query: 427 HTAQRLKEAEKLGFSQAVLPSAS 449
              +R+ EA K GF +A++P+A+
Sbjct: 411 SGQERISEAAKHGFRRAIVPAAN 433