Pairwise Alignments

Query, 412 a.a., transporter from Sinorhizobium meliloti 1021

Subject, 396 a.a., bicyclomycin/multidrug efflux system (NCBI) from Escherichia coli BW25113

 Score =  182 bits (463), Expect = 1e-50
 Identities = 117/394 (29%), Positives = 201/394 (51%), Gaps = 8/394 (2%)

Query: 12  SGLTKVQFIALMAMLMSINAISIDIMLPGLQEIGASLGVADENHRQYVITAYLLGMGFAQ 71
           S    V  + L+AMLM +   SID+ LP L  I A  GV      Q  ++ Y+LG    Q
Sbjct: 7   SSFAIVFILGLLAMLMPL---SIDMYLPALPVISAQFGVP-AGSTQMTLSTYILGFALGQ 62

Query: 72  LFFGPLSDRFGRRAPLLGGLALYGVSALAIVFVPTFGALLFLRLVQGIGAAATRVITVSI 131
           L +GP++D FGR+  +LGG  ++  +A+A     T   L+ +R   G+ AAA  V+  ++
Sbjct: 63  LIYGPMADSFGRKPVVLGGTLVFAAAAVACALANTIDQLIVMRFFHGLAAAAASVVINAL 122

Query: 132 VRDVYGGRQMAEIMSLVMMVFMIVPVIAPSIGQLIMLFSEWHMIFVVIALFAVAVALPVA 191
           +RD+Y   + + +MS VM+V  I P++AP +G  ++++  WH IF ++AL A+  +  + 
Sbjct: 123 MRDIYPKEEFSRMMSFVMLVTTIAPLMAPIVGGWVLVWLSWHYIFWILALAAILASAMIF 182

Query: 192 LRLRETLAPANRRPFTASSILAGFRIVLTNRLALFYTLATSALLGALFGFINSAQQILVG 251
             ++ETL P  R+PF   + +  F  +  ++  L Y LA+      +F F+++   + + 
Sbjct: 183 FLIKETLPPERRQPFHIRTTIGNFAALFRHKRVLSYMLASGFSFAGMFSFLSAGPFVYIE 242

Query: 252 VYGLGVW-FPAVFAAFAGMMAVASFTNSRLVRTFGMRALSHAAL-LGFTLASFIWMSASL 309
           +  +    F   FA     + V +  NSR VR  G   +  + L + F +A+  WM  S 
Sbjct: 243 INHVAPENFGYYFALNIVFLFVMTIFNSRFVRRIGALNMFRSGLWIQFIMAA--WMVISA 300

Query: 310 IGPLPLPLFMLLHAATMFQFGLIAANFNAMAMEPLGHVAGTASSVLGFTQTIGGGIIGAF 369
           +  L     ++  AA +    ++++N  A+ ++   H+AGTASS+ G  +   G I+GA 
Sbjct: 301 LLGLGFWSLVVGVAAFVGCVSMVSSNAMAVILDEFPHMAGTASSLAGTFRFGIGAIVGAL 360

Query: 370 IGQAFNNSVTPLAVGFFTVAVVALVCVLIAEGGK 403
           +  A  NS  P+       A  +++  L A   K
Sbjct: 361 LSLATFNSAWPMIWSIAFCATSSILFCLYASRPK 394