Pairwise Alignments

Query, 599 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 1098 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  112 bits (280), Expect = 8e-29
 Identities = 80/224 (35%), Positives = 113/224 (50%), Gaps = 7/224 (3%)

Query: 32   QPIVEATTGAVFGYESLMRG-FERLGFASPVELLDKAEAAGQLLALEHLINSRAVAAFAT 90
            QP V+A    + G E+L+R    +LG  SP E +   E +G +L +   I   A AAF  
Sbjct: 859  QPQVDARGNRIVGAEALVRWQHPQLGAQSPSEFIKVLEDSGLILEVGTWILDEACAAFQQ 918

Query: 91   L-----PDFSARTLFLNFDARLIGGEGDIVERLVSHLKRANIAPSSLCFELSERFDSSKM 145
            L      D    +L +N   R    + D VER+   LK+  +  S L  E++E      +
Sbjct: 919  LIAEGLVDPLNFSLCVNISPRQFR-QNDFVERVERSLKQHKLPFSLLKLEITEGIVIQNL 977

Query: 146  PDFPVLVRQLRLAGFKLAIDDFGAGFSGLKLLCDQPVDYVKIDRHFVSEIDKDARKRHLV 205
             D    +R+L+  G   A+DDFG G+S L  L   PVD +KID+ FV +   D     ++
Sbjct: 978  DDTISKMRRLKKLGVSFAMDDFGTGYSSLTYLKRLPVDALKIDQSFVRDATHDPNDAEII 1037

Query: 206  RHTVNMAHALGTRVIAEGVETEAEFLVCRDLGCDLMQGYFIARP 249
            R  V MA +L   VIAEGVET+ +    + LGC L QGY  +RP
Sbjct: 1038 RAIVAMARSLNLEVIAEGVETQDQLAFLQGLGCHLYQGYLHSRP 1081



 Score = 45.8 bits (107), Expect = 9e-09
 Identities = 38/126 (30%), Positives = 58/126 (46%), Gaps = 9/126 (7%)

Query: 401 SLLKIINEKQLKMAQEQNPLTGLPGNRAIRDYV--QNAILDGDQAR-YFCYCDFDDFKPF 457
           SLLK   + Q++     +PLT LP    + D +  Q A+L     R    + D D FK  
Sbjct: 648 SLLKNA-QAQIRHLAYHDPLTNLPNRALLMDRLSQQIALLKRHNLRGALLFLDLDHFKHI 706

Query: 458 NDTYGFQKGDLAITLFAALLRRHFIGEEKFLGHVGGDDFFI---GIDGCTEEDIRGVLSR 514
           ND+ G   GD  + +  A L    +  E  +  +GGD+F +   G+DG T  ++   +  
Sbjct: 707 NDSLGHPVGDTVLKIVTARLEAS-VRMEDTVARLGGDEFVVLLSGLDG-TRTEVSNQVQE 764

Query: 515 LIDDFR 520
           L D  R
Sbjct: 765 LADTLR 770