Pairwise Alignments

Query, 599 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 589 a.a., diguanylate phosphodiesterase from Pseudomonas simiae WCS417

 Score =  260 bits (664), Expect = 1e-73
 Identities = 179/568 (31%), Positives = 271/568 (47%), Gaps = 20/568 (3%)

Query: 22  LAKLVIENALQPIVEATTGAVFGYESLMRGFERLGFASPVELLDKAEAAGQLLALEHLIN 81
           LA+  + +  QPI+  +   + GYE+L RG       SPV L   A  AG+L  LE    
Sbjct: 14  LAQGSLHSLFQPIISLSDRRILGYEALSRGPSNSPLHSPVALFSVASQAGRLSELEIACR 73

Query: 82  SRAVAAFAT--LPDFSARTLFLNFDARLIGGEGDIVERLVSHLKRANIAPSSLCFELSER 139
             A   F+   LP      LFLN   + +        R +  L    I PS +  EL+E+
Sbjct: 74  ESACRRFSEQKLPG----KLFLNVSPQSLMETAHQPGRTLQLLHDFGIPPSQVVIELTEQ 129

Query: 140 FDSSKMPDFPVLVRQLRLAGFKLAIDDFGAGFSGLKLLCDQPVDYVKIDRHFVSEIDKDA 199
             ++ +      +   R  GF +A+DD GAG+S L+L  +   DYVKIDRHF+  I +DA
Sbjct: 130 TPTNDIDLLQTALHHYRNMGFSIALDDLGAGYSSLRLWSELRPDYVKIDRHFIDGIHQDA 189

Query: 200 RKRHLVRHTVNMAHALGTRVIAEGVETEAEFLVCRDLGCDLMQGYFIARPTTH-IMELQA 258
            KR  V   + +A A   +VIAEG+E   E  V  ++G DL+QGY + RP      E + 
Sbjct: 190 LKREFVGSILQIARASRAQVIAEGIELPEELAVLTEMGVDLVQGYLLCRPQEQPPQEARL 249

Query: 259 VYPHLEPTSGTRRPSSTLDSILIRKEIEQLPAVRESDDLDSVFHLFRLNPRQAFFPVLNA 318
           + P  +  +       +  S L+ ++    PAV +      V   FR         VL+ 
Sbjct: 250 MLPKPDSANVALNDEGSDLSALLNEQ----PAVDQDTATAQVLEAFRRQANLNSLAVLDG 305

Query: 319 NGEPRGILHEYHVKEMIYHPFGRDLLKNRLYQRRISHFVTPAPIADLDTPADEMLKIFAG 378
            G P GI+H + + + +  PF  DL   +   R +S       ++        +L   A 
Sbjct: 306 RGHPIGIVHRHSLSDALLKPFATDLFARKPISRLMSADFLAVELSQSLQQVSRLLTSRAR 365

Query: 379 MDGSDCVMLTENMRYAGILSASSLLKIINEKQLKMAQEQNPLTGLPGNRAIRDYVQNAIL 438
               +  ++T N  Y G+     +LK+I E +++ A+  NPLT LPGN  I+  +   +L
Sbjct: 366 QRIEEDFIITLNGDYLGLGRVIDVLKLITELKIQQARYANPLTLLPGNVPIQQCL-TRLL 424

Query: 439 DGDQARYFCYCDFDDFKPFNDTYGFQKGDLAITLFAALLRRHFIGEEKFLGHVGGDDFFI 498
              +    CY D D FKPFND YG+ +GD  +   A  L         F+GH+GGDDF +
Sbjct: 425 QQQRESVICYVDIDSFKPFNDIYGYGRGDEVLLCLAQCLNDRVDPSRDFVGHIGGDDFLL 484

Query: 499 GIDGCTEEDIRGVLSRLIDDFRSDVRQLYSPEHLSAGRISGYGRDGLTKAFPLMRCSIAV 558
            +     +D R  L++L+DDF +  R+ Y  EHL AG      R G+ + F L+  SI V
Sbjct: 485 VLG---PQDWRKRLNQLLDDFHTQCRRFYRAEHLEAGCFVALNRQGVRQEFALLSLSIGV 541

Query: 559 LVL-PEGLVLSDGQTVSKRIAEIKARAK 585
           + L P+      GQ  + ++AE+ ++AK
Sbjct: 542 VHLYPQAC----GQLDASQLAELASQAK 565