Pairwise Alignments

Query, 391 a.a., RepA2 replication protein from Sinorhizobium meliloti 1021

Subject, 413 a.a., Plasmid replication protein RepA from Variovorax sp. SCN45

 Score =  154 bits (389), Expect = 4e-42
 Identities = 106/349 (30%), Positives = 179/349 (51%), Gaps = 14/349 (4%)

Query: 32  PNARRTMRKFTSTEVATLLGVTEAYIRQVAAKEQGPEPEI--ANGRRFYTLEQVLELRMA 89
           P AR+    +++ ++A L GV +A++     KE  P   +  A G+R + L +       
Sbjct: 54  PEARKIAPIYSTAQLAALCGVDKAHVAYRITKEDLPSGRLTPAGGKRSFELNE------- 106

Query: 90  LAANGRKKWMNPRRTGNEQCQIVAVTNFKGGSSKTSTTIHLGHYLALKGYRVLAVDLDPQ 149
           L A  R    +  R   ++   +AV NFKGG +KT+T + L   L+L+G+RVLA+D DPQ
Sbjct: 107 LRAWTRTYRADKMRPAGKKAFTIAVGNFKGGVAKTTTAMVLAQGLSLRGHRVLAIDTDPQ 166

Query: 150 ASLTALHGSLPEFDYRGGDTLFSAIRFDDPVPTKSIIHKTHIVGFDVICAGLELTEFETA 209
            SLT LHG LPE +    D   + +        +  I  T+  G D++ A   L   E A
Sbjct: 167 GSLTTLHGLLPEAEI-SEDMTIAPLCDGSQSDIRYAIRSTYWDGLDLVAAAPFLFSAEFA 225

Query: 210 VALEMRRSAGTGFLLRVSQALEQVADDYDFVLMDSAPSLNFLTLSSLTAATGVIIPVPAH 269
           +     +  G  F   ++  LE V D YD +++D+ PSL+++T+++L AA G+I+PVP  
Sbjct: 226 LPARQMQEPGARFWDVLNAGLESVRDLYDVIVIDTPPSLSYVTINALWAANGIIVPVPPS 285

Query: 270 MLDVDSTAKFLELAGSYMQILNEVG---TAAQWDFAKFLITKFEPNDHPQANMSALMRQV 326
            LD  S+A+F  L       L+  G       ++F   L+++ +P+D     +   ++  
Sbjct: 286 GLDFASSAQFWSLLADLGGNLDAQGGDLARKAFEFLHVLLSRVDPSDPATPAVRQWIQAT 345

Query: 327 FGEDLLLNSVIKSTAVADALTWKQSLYEVQRSRFSAPKTYDRAIESINA 375
           +GE  L   + K++  ++      ++Y+VQ+    A KTY RA ++ +A
Sbjct: 346 YGEYTLPVEIPKTSVTSNKAAEFATVYDVQKYE-GAAKTYKRAADAYDA 393