Pairwise Alignments

Query, 391 a.a., RepA2 replication protein from Sinorhizobium meliloti 1021

Subject, 398 a.a., Plasmid replication protein RepA from Sphingobium sp. HT1-2

 Score =  187 bits (476), Expect = 3e-52
 Identities = 124/384 (32%), Positives = 200/384 (52%), Gaps = 14/384 (3%)

Query: 11  MENFSSKLEMALNNLSMAQFPPNARRTMRKFTSTEVAT-LLGVTEAYIRQVAAKEQGPEP 69
           ++   +  E A + L  A   P+ R+T+       VA   LG T   + +  A+ + P P
Sbjct: 7   LDTMITSCENAKSVLRRAAIDPSDRKTLSITMGASVAAEFLGRTPEALAKAEARGRLPAP 66

Query: 70  EIAN-GRRFYTLEQVLELRMALAANGRKKWMNPRRTGNEQCQIVAVTNFKGGSSKTSTTI 128
           + AN GRRFYT+E ++ +R AL     K         +E+  +VAV NFKGG SK++T+ 
Sbjct: 67  KTANNGRRFYTVEDLIAIREALGIKAGK-------LPDERAVVVAVQNFKGGVSKSTTSK 119

Query: 129 HLGHYLALKGYRVLAVDLDPQASLTALHGSLPEFDYRGGDTLFSAI--RFDDPVPTKSII 186
           HL  YLAL+GYRVL VD DPQAS++ +     E       TL + +  R D+    +  I
Sbjct: 120 HLADYLALRGYRVLVVDCDPQASMSVMFDVNLEELVEETHTLSNYLSPRIDEADSFRKTI 179

Query: 187 HKTHIVGFDVICA--GLELTEFETAVALEMRRSAGTGFLLRVSQALEQVADDYDFVLMDS 244
             T     D+  A  GL+ TE+E    +E    A  G    +   LE+V  DYD +++D 
Sbjct: 180 KPTAWPNIDICPANLGLQDTEWELTATIEEGPHAIAGAFRMLRVGLEEVRHDYDVIILDP 239

Query: 245 APSLNFLTLSSLTAATGVIIPVPAHMLDVDSTAKFLELAGSYMQILNEVGTAAQWDFAKF 304
            P++ FL +++L+AA G++IPVPA  LD  ST  F++     M ++++   +  + F + 
Sbjct: 240 PPAMGFLGVNTLSAADGLLIPVPARQLDYLSTIHFMQTCREAMSLVSKFDNSIDYGFIRV 299

Query: 305 LITKFEPNDHPQANMSALMRQVFGEDLLLNSVIKSTAVADALTWKQSLYEVQRSRFSAPK 364
           + T F+PN   +A M  +M + +   +L   ++ S  + +A     S+YE+ +  + + +
Sbjct: 300 VCTMFQPNRTNEAQMLQVMEKTYAGQMLSTPILLSEEIKNAGIAMSSIYEINKP-YGSHQ 358

Query: 365 TYDRAIESINAANAELEGLFWKAW 388
           TY R  +++NA   ELE    K W
Sbjct: 359 TYTRCRDNLNAVFKELEKDICKQW 382