Pairwise Alignments

Query, 391 a.a., RepA2 replication protein from Sinorhizobium meliloti 1021

Subject, 401 a.a., Plasmid replication protein RepA from Sphingobium sp. HT1-2

 Score =  169 bits (428), Expect = 1e-46
 Identities = 103/364 (28%), Positives = 197/364 (54%), Gaps = 16/364 (4%)

Query: 31  PPNARRTMRKFTSTEVATLLGVTEAYIRQVAAKEQGPEP---EIANGRRF-YTLEQVLEL 86
           P    +    F  ++ A L+  T + IR+  A+  G  P     A+G R  Y+LE++  +
Sbjct: 40  PETGAKKGPSFPISKAAALVSRTASAIRE--AERDGRLPARGRTASGHRVQYSLEELDHM 97

Query: 87  RMALAANGRKKWMNPRRTGNEQCQIVAVTNFKGGSSKTSTTIHLGHYLALKGYRVLAVDL 146
           R      G + W +P     +   I++V+NFKGG  K++  +HL  + A++GYRVL +D 
Sbjct: 98  REVF---GTRPWRSPE----DVPAIISVSNFKGGVGKSTIALHLAQHFAIRGYRVLFIDC 150

Query: 147 DPQASLTALHGSLPEFDYRGGDTLFSAIRFDDPVPTKSIIHKTHIVGFDVICAGLELTEF 206
           D QAS T + G  P+ D    DTL+      + +  + II KTH  G D+I A L+L   
Sbjct: 151 DSQASSTMMFGYRPDIDLSEEDTLYGHFHNPELLGVRKIIRKTHFFGLDLIPANLKLYNL 210

Query: 207 ETAVALEMRRSAGTGFLLRVSQALEQVADDYDFVLMDSAPSLNFLTLSSLTAATGVIIPV 266
           E  +A  + ++     +  ++QA++ V DDYD V+MD  P+L  ++++ L AA  ++IPV
Sbjct: 211 EYEIAGYLAQNQSFDIIDMIAQAIDDVVDDYDVVIMDPPPALGMVSMAVLQAANAMVIPV 270

Query: 267 PAHMLDVDSTAKFLELAGSYMQILNEVGTAAQ--WDFAKFLITKFEPNDHPQANMSALMR 324
           P  ++D  ST  F+++A + M+ L ++    +  ++F + + ++ + +   Q+ +  +MR
Sbjct: 271 PPSVIDFASTVSFIDMARTTMRQLEKLAGRVKPAYNFIRLVGSRVDESKSMQSEILTMMR 330

Query: 325 QVFGEDLLLNSVIKSTAVADALTWKQSLYEVQRSRFSAPKTYDRAIESINAANAELEGLF 384
           QVFG  ++ + +  S  + +A +  ++++E+ R   ++ + ++R ++ +N    ++E   
Sbjct: 331 QVFGGSMISSVLRTSAEIDNASSRMKTVFELDRP-VTSHEVHNRCVKYLNEVCLDIEKDV 389

Query: 385 WKAW 388
            + W
Sbjct: 390 LRTW 393