Pairwise Alignments

Query, 188 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 197 a.a., transcriptional repressor for divergent bdcA from Escherichia coli BL21

 Score = 52.0 bits (123), Expect = 7e-12
 Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 17/191 (8%)

Query: 3   RIKEFDRDEALDAAIAVFREHGFEGTSTEMLLKAMKIGRQSLYDTFGDKWKLYCLAVERY 62
           R + F  ++A+ AA  +F + GF+  S   +   + I   SLY  FG+K  L+   +  Y
Sbjct: 12  RPRRFAPEQAVSAAKVLFHQKGFDAVSVAEVTDYLGINPPSLYAAFGNKAGLFSRVLNEY 71

Query: 63  SASETSAHIALLRGKPRALEGIRLVMERVVDNANQ-----ACLGVNSICEFGQSRPDLAA 117
             +E      +LR      E +  V++      +Q      C+ +  I        D+A 
Sbjct: 72  VGTEAIPLADILRDDRPVGECLAEVLKEAARRYSQNGGCAGCMVLEGIHSHDPQARDIAV 131

Query: 118 -LHHAADRRLKNVVVERIREAQAAGDLAVSLPAEAVADFLVANIAGIRIAARGGARREHL 176
             +HAA+  + + +  R  ++           A+ V DF+   ++G+   AR G   E L
Sbjct: 132 QYYHAAETTIYDYIARRHPQS-----------AQCVTDFMSTVMSGLSAKAREGHSIEQL 180

Query: 177 QSLSRLALRAV 187
            + + LA  A+
Sbjct: 181 CATAALAGEAI 191