Pairwise Alignments

Query, 314 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 300 a.a., hypothetical protein from Variovorax sp. SCN45

 Score =  111 bits (277), Expect = 2e-29
 Identities = 88/289 (30%), Positives = 135/289 (46%), Gaps = 18/289 (6%)

Query: 16  AVLRIATPLILGTLGALLCERSGVLNLGIEGIMTFGAMIGWLAVYNGADLWTGILVA-GL 74
           ++L   TPLI  TL  +L +R+G+ NLG+EG+M  G+    + +         +L+A GL
Sbjct: 7   SILISGTPLIYVTLAGVLAQRAGIWNLGLEGLMIIGSCALIVGIVQTGSFAQAMLIAVGL 66

Query: 75  SGGIFGLLHAGLTVTLGLSQHVSGLGVTLFASSFSYYVFRLLVPVAGTPPTIEPFQPIDV 134
                 LL   +   L  +  ++GLG+T      +    + L     T        P  +
Sbjct: 67  CVAASALLW-WVVERLKANPIIAGLGLTGLGLGGTSLAIQALYDSEATVTA-----PFGI 120

Query: 135 PALSSL------PFLGPALFTQTPPTYVAILLALVLGYVLFRTPLGLAIRMTGENPHAAE 188
           P L+SL      PF G ++F    P  VA+ L  +L   L RT LGL +  +GE+P AA 
Sbjct: 121 PKLNSLFGADLGPFGGLSVFVLLMP--VAVWLVWLL---LERTRLGLQMSASGEHPFAAR 175

Query: 189 AQGINPMAIRFGSVIVGSALMGIGGAFLTLSAFNSFFPTMVQGRGWICIALVVFASWRPG 248
           + G+NP  +R  ++ +G  L  IGGA L   +   F   M  GRG++  A V+F +    
Sbjct: 176 SVGVNPSRMRLLALALGGVLCAIGGAELAGGSLQIFSQNMTAGRGFMAFAAVIFGAGGAL 235

Query: 249 RALVGALLFALFDGFQLRLQTRLSGVVPYQIFLMIPYLLSIAALALMAR 297
            A   AL FA+     +R Q    G +   +   +PYL +I  + L  R
Sbjct: 236 GATAAALFFAVVSALGIRAQLVYGGAISNDLLQSLPYLATIFGVWLSTR 284