Pairwise Alignments

Query, 314 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 373 a.a., ABC transporter, permease protein 1 (cluster 11, riboflavin/purine nucleoside/unknown) from Variovorax sp. SCN45

 Score = 68.9 bits (167), Expect = 2e-16
 Identities = 73/265 (27%), Positives = 117/265 (44%), Gaps = 22/265 (8%)

Query: 4   VTDIFASAGLWAAVLRIATPLILGTLGALLCERSGVLNLGIEGIMTFGAMIGWLAVYNGA 63
           VT  F     + AVL  A P+IL  L   +  R+   NLG+EG M +GA IG  AV    
Sbjct: 70  VTQTFLDGQNFRAVLFQAAPMILVGLAGAIAFRARFWNLGLEGQMIWGA-IGATAV---- 124

Query: 64  DLWTG---------ILVAGLSGGIFGLLH-AGLTVTLGLSQHVSGLGVTLFASSFSYYVF 113
            +W           + VA +  G+  +L  A L + LG+++ +S L +   A++F   + 
Sbjct: 125 SMWQIGPENLRLPLMFVAAVGCGLLWVLGPAWLKLKLGVNEIISTLMLNYMAANF---LL 181

Query: 114 RLLVPVAGTPPTIEPFQPIDVPALSSLPFLGPALFTQTPPTYVAILLALVLGYVLFRTPL 173
            L+      P    P+ P    A   LP +G  + +      +A ++AL+  +++  +  
Sbjct: 182 HLVYGSWKDPKDNFPYSP-QFRAFERLPEIGAGVGSSI---LLAGVVALLAWWLVSVSRA 237

Query: 174 GLAIRMTGENPHAAEAQGINPMAIRFGSVIVGSALMGIGGAFLTLSAFNSFFPTMVQGRG 233
           GL +R    NP  A A G+      +G+V++  A+ G+ G  +             QG G
Sbjct: 238 GLYLRFVDANPRVAHANGVPVRRTIYGAVLLSGAMAGLAGFAVAAGQEGRLTQAFYQGYG 297

Query: 234 WICIALVVFASWRPGRALVGALLFA 258
           +  I +   A   P  A V ALL A
Sbjct: 298 FSGILIAFLARNNPLAATVVALLVA 322