Pairwise Alignments

Query, 314 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 307 a.a., Nucleoside ABC transporter, permease protein 2 from Variovorax sp. SCN45

 Score =  397 bits (1019), Expect = e-115
 Identities = 203/314 (64%), Positives = 241/314 (76%), Gaps = 7/314 (2%)

Query: 1   MNAVTDIFASAGLWAAVLRIATPLILGTLGALLCERSGVLNLGIEGIMTFGAMIGWLAVY 60
           M  + DI A+   W AVLRIATPLILGTLG LLCER+GVLNLGIEGIM  GA  GWLAVY
Sbjct: 1   MTDLLDILANPAFWVAVLRIATPLILGTLGVLLCERAGVLNLGIEGIMVAGAFTGWLAVY 60

Query: 61  NGADLWTGILVAGLSGGIFGLLHAGLTVTLGLSQHVSGLGVTLFASSFSYYVFRLLVPVA 120
            GA LW G+ VA L+G +FGLLHA LTV L LSQHVSGLG+TL A++ SY+ +R+  P  
Sbjct: 61  AGAPLWVGVGVAALTGMVFGLLHAFLTVGLALSQHVSGLGITLLATALSYFGYRVSFPKV 120

Query: 121 GTPPTIEPFQPIDVPALSSLPFLGPALFTQTPPTYVAILLALVLGYVLFRTPLGLAIRMT 180
            TPPTI PF P+D      LP   P L  QT  T  A+LL  V+G+VL+RTPLGLA+RM 
Sbjct: 121 NTPPTITPFAPMDW-----LPV--PILNAQTALTLFALLLVPVVGWVLYRTPLGLALRMA 173

Query: 181 GENPHAAEAQGINPMAIRFGSVIVGSALMGIGGAFLTLSAFNSFFPTMVQGRGWICIALV 240
           GENP AAE+QG++  A R G+++ GSALMG+ G+FLTLSAFN+FF  MV GRGWIC+ALV
Sbjct: 174 GENPQAAESQGVSVAATRTGAIVAGSALMGMAGSFLTLSAFNAFFFNMVNGRGWICVALV 233

Query: 241 VFASWRPGRALVGALLFALFDGFQLRLQTRLSGVVPYQIFLMIPYLLSIAALALMARRAR 300
           VFASWRPG+AL+GALLFA FD  QLRLQ     V+PYQ++LM+PYLLSI AL L+AR+A 
Sbjct: 234 VFASWRPGKALLGALLFAFFDALQLRLQQSGDAVLPYQLYLMLPYLLSILALVLVARKAS 293

Query: 301 VPQALMQPYRRGER 314
            PQALM+PYR+GER
Sbjct: 294 YPQALMKPYRKGER 307