Pairwise Alignments

Query, 314 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 306 a.a., Nucleoside ABC transporter, permease protein 2 from Variovorax sp. SCN45

 Score =  179 bits (453), Expect = 1e-49
 Identities = 113/306 (36%), Positives = 160/306 (52%), Gaps = 13/306 (4%)

Query: 13  LWAAVLRIATPLILGTLGALLCERSGVLNLGIEGIMTFGAMIGWLAVYNGADLWTGILVA 72
           L  + L   T L +  LG L+ E++G++NLG EGIM   A+ G+  V    + W G L  
Sbjct: 7   LLGSTLSAGTVLAIAALGLLINEKAGIVNLGAEGIMLCAAIAGFATVVTTHNPWLGFLAG 66

Query: 73  GLSGGIFGLLHAGLTVTLGLSQHVSGLGVTLFASSFSYYVFRLLVPVAGTPPTIEPFQPI 132
             +G +       L + L  +Q+ +GL ++LF   FS +     V  A  P +       
Sbjct: 67  MAAGALLAAFFGVLVIWLNTNQYATGLALSLFGVGFSAFAGINFVQ-AKLPESAS----Y 121

Query: 133 DVPALSSLPFLGPALFTQTPPTYVAILLALVLGYVLFRTPLGLAIRMTGENPHAAEAQGI 192
            +P L  +P +GPALF   P  YVA+ L   L + L+RT  GL +R  GE+P +A A G 
Sbjct: 122 AIPVLGDIPLIGPALFRHHPMVYVAMALTAALIWFLYRTRAGLVLRSVGESPESAHALGY 181

Query: 193 NPMAIRFGSVIVGSALMGIGGAFLTLSAFNSFFPTMVQGRGWICIALVVFASWRPGRALV 252
               IRF +VI G AL G+ GA+L+      +   MV GRGWI +AL  FA+WRP R L+
Sbjct: 182 PVRRIRFLAVIAGGALCGLAGAYLSTVYTPLWVEGMVAGRGWIALALTTFATWRPVRVLL 241

Query: 253 GALLFALFDGFQLRLQTRLSGV-VPYQIFLMIPYLLSIAALALMAR-----RARVPQALM 306
           GA LF         LQ+  SGV VP Q   M+ Y+  I  LAL++R     RA +P ++ 
Sbjct: 242 GAYLFGGVSMLGFHLQS--SGVDVPPQFLSMLQYIAPIVVLALISRNPAFIRANMPASIG 299

Query: 307 QPYRRG 312
           +P+  G
Sbjct: 300 KPFYPG 305