Pairwise Alignments

Query, 314 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 323 a.a., ABC transporter, membrane spanning protein (sugar/ribonucleotide) from Agrobacterium fabrum C58

 Score =  150 bits (378), Expect = 5e-41
 Identities = 99/303 (32%), Positives = 153/303 (50%), Gaps = 15/303 (4%)

Query: 16  AVLRIATPLILGTLGALLCERSGVLNLGIEGIMTFGAMIGWLAVYNGADLWTGILVAGLS 75
           + +R+  PL+   L  L  ER+GV ++G+EG M   A       Y  A+ W G+L AG+ 
Sbjct: 13  STVRLTIPLLFTALAGLFSERAGVFDIGLEGKMLAAAFASACVAYLTANPWAGLL-AGIG 71

Query: 76  GGI-FGLLHAGLTVTLGLSQHVSGLGVTLFASSFSYYVFRLLVPVAGTPPTIEP---FQP 131
             I F L+H    +T   +Q VSG+ +   A+  +  + +      G  P +     F P
Sbjct: 72  VSILFSLIHGFAVITNRGNQIVSGVALNFIAAGLTVVLGQAWFGQGGRTPQLPGEGRFAP 131

Query: 132 IDVP---ALSSLPFLGP----ALFTQTPPTYVAILLALVLGYVLFRTPLGLAIRMTGENP 184
           I +P   A+  +PF+GP     +      TY+A L   +  +VL+RT  GL +R  GENP
Sbjct: 132 IILPGADAMREVPFIGPLYANVISGNNILTYLAFLAVPLSWWVLYRTRFGLRLRAVGENP 191

Query: 185 HAAEAQGINPMAIRFGSVIVGSALMGIGGAFLTLSAFNSFFPTMVQGRGWICIALVVFAS 244
            A +  GI+   +R+ +VIV   L G  GA+L ++   +F   M  G+G+I +A ++FA 
Sbjct: 192 GAVDTAGISVTWMRYRAVIVAGFLCGFSGAYLAVAQSAAFIANMSAGKGYIALAALIFAK 251

Query: 245 WRPGRALVGALLFALFDGFQLRLQTRL---SGVVPYQIFLMIPYLLSIAALALMARRARV 301
           W+P   +   LLF   D F   +Q +     G VP QIF  +PY+L+   LA     A+ 
Sbjct: 252 WKPVPVMFACLLFGFLDAFANFMQGKSVPGIGEVPVQIFQAMPYILTCILLAGFIGVAKP 311

Query: 302 PQA 304
           P+A
Sbjct: 312 PKA 314