Pairwise Alignments

Query, 508 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 510 a.a., D-ribose transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  282 bits (721), Expect = 2e-80
 Identities = 175/495 (35%), Positives = 274/495 (55%), Gaps = 18/495 (3%)

Query: 3   EAILNICSVSKRFGDNLANDDISLSLGKGEIVALLGENGAGKTTLMSILFGHYVPD-SGK 61
           E +L +  +SK F        + L +  GEI AL+GENGAGK+TLM IL G Y  D  G+
Sbjct: 4   EPLLEMQGISKTFNGLRVLKTVGLKVYPGEIHALMGENGAGKSTLMKILSGAYQADPGGE 63

Query: 62  VLVEGRELPPGKPRAAIRAGIGMVHQHFSLAPNLTVLENVMAGTERLWHLRSGTSAARRK 121
           + + G+ +P   P  A   GI +++Q  SL PNL+V EN+  G E    LR G +  R+ 
Sbjct: 64  IRIAGQLIPTFDPATAKALGIAVIYQELSLCPNLSVAENIYLGRE----LRRGWTIDRKG 119

Query: 122 LHRIC----QRFGLTVEPDARVGDLSVGEQQRVEILKALYNDAHILVLDEPTAVLTNLEA 177
           +   C    QR G    P  RV  LS+ E+Q VEI +AL+  A ILV+DEPT  L++ E 
Sbjct: 120 MEAGCIEVLQRLGAEFTPATRVSSLSIAERQLVEIARALHAHAKILVMDEPTTPLSSRET 179

Query: 178 ERLFSTLKDMAREGLSLIFISHKLDEVMAAANRIVVLRGGRKVAERLAKETNKAELAELM 237
           +RLF+ +K +  +GL++I+ISH++ E+ A ++R+ VLR G  + E      +   L ++M
Sbjct: 180 DRLFALIKQLRSQGLAIIYISHRMAEIYALSDRVSVLRDGHYIGELTRDALSAEALVKMM 239

Query: 238 VGRRVA---RPVREPSTPGEVVLKVADVSVSIDGVERLKSIDFSLRAGEVLGIIGVSGNG 294
           VGR ++   +       PG VV++V D++   DG +R++   F L AGEVLGI G+ G G
Sbjct: 240 VGRDLSGFYKKEHAAYNPGNVVMRVRDMA---DG-KRVRHCSFDLHAGEVLGIAGLVGAG 295

Query: 295 QTTLAHLLSGTLRRDKGDLLLFGEPIGDL-TVDDAVRAGIGRIPEDRNKEGAIGEMAIWE 353
           +T LA L+     R  G L + G+ +  L T  DA+RAG+  + EDR  +G   +M++ +
Sbjct: 296 RTELARLIFAADPRTSGTLEVVGKAVTPLRTPADAIRAGVVYLTEDRKAQGLFLDMSVAD 355

Query: 354 NA-VLERLPRFSRYGLVDRPSGQAFAGQIIDAFDVRGGRPTTRTRLLSGGNMQKLILGRN 412
           N  V   +P     G++DR      +   I +  +R          LSGGN QK++L R 
Sbjct: 356 NINVCACVPDAHAGGVLDRDHALQRSNDAIKSLSIRVASGKVNAGALSGGNQQKVLLARL 415

Query: 413 LMDRPRILLAAQPARGLDEGAVAAVHERLLEARRAGTAVLLISEDLEEVMALADRIQAIV 472
           L  +P +L+  +P RG+D G+ + ++  + +  +AG  +++IS +L E++   DR+  + 
Sbjct: 416 LEVKPHVLILDEPTRGVDIGSKSEIYRIINQLAQAGIGIVVISSELPEIIGTCDRVLIMR 475

Query: 473 NGRLSPPIAADSASA 487
            G+L   +   S  A
Sbjct: 476 EGQLVAEVGGASGQA 490



 Score = 78.2 bits (191), Expect = 7e-19
 Identities = 63/244 (25%), Positives = 114/244 (46%), Gaps = 7/244 (2%)

Query: 254 EVVLKVADVSVSIDGVERLKSIDFSLRAGEVLGIIGVSGNGQTTLAHLLSGTLRRDKG-D 312
           E +L++  +S + +G+  LK++   +  GE+  ++G +G G++TL  +LSG  + D G +
Sbjct: 4   EPLLEMQGISKTFNGLRVLKTVGLKVYPGEIHALMGENGAGKSTLMKILSGAYQADPGGE 63

Query: 313 LLLFGEPIGDLTVDDAVRAGIGRIPEDRNKEGAIGEMAIWENAVLERLPRFSRYGLVDRP 372
           + + G+ I       A   GI  I ++ +       +++ EN  L R  R  R   +DR 
Sbjct: 64  IRIAGQLIPTFDPATAKALGIAVIYQELS---LCPNLSVAENIYLGRELR--RGWTIDRK 118

Query: 373 SGQAFAGQIIDAFDVRGGRPTTRTRLLSGGNMQKLILGRNLMDRPRILLAAQPARGLDEG 432
             +A   +++         P TR   LS    Q + + R L    +IL+  +P   L   
Sbjct: 119 GMEAGCIEVLQRLGAEF-TPATRVSSLSIAERQLVEIARALHAHAKILVMDEPTTPLSSR 177

Query: 433 AVAAVHERLLEARRAGTAVLLISEDLEEVMALADRIQAIVNGRLSPPIAADSASATKLGL 492
               +   + + R  G A++ IS  + E+ AL+DR+  + +G     +  D+ SA  L  
Sbjct: 178 ETDRLFALIKQLRSQGLAIIYISHRMAEIYALSDRVSVLRDGHYIGELTRDALSAEALVK 237

Query: 493 MMAG 496
           MM G
Sbjct: 238 MMVG 241