Pairwise Alignments

Query, 508 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 542 a.a., Ribose ABC transporter, ATP-binding protein RbsA (TC 3.A.1.2.1) from Variovorax sp. SCN45

 Score =  286 bits (731), Expect = 2e-81
 Identities = 186/521 (35%), Positives = 284/521 (54%), Gaps = 37/521 (7%)

Query: 2   SEAILNICSVSKRFGDNLANDDISLSLGKGEIVALLGENGAGKTTLMSILFGHYVPDSGK 61
           ++ +L++ ++ K +   +  DD+SL L  GE++AL GENGAGK+TL  I+ G   P  G+
Sbjct: 6   AQPVLSLSTMGKDYAAPVL-DDVSLVLNAGEVLALTGENGAGKSTLSKIVCGLVQPTRGQ 64

Query: 62  VLVEGRELPPGKPRAAIRAGIGMVHQHFSLAPNLTVLENVMAGTERLWHLRSGTSAARR- 120
           +L++G+   PG  R A R G+ MV Q   L   L+V EN++     L  L S T   RR 
Sbjct: 65  MLLDGQPFAPGSRRDAERLGVRMVMQELGLVTTLSVAENLL-----LDRLPSKTGWIRRG 119

Query: 121 KLHRICQR----FGL-TVEPDARVGDLSVGEQQRVEILKALYNDAHILVLDEPTAVLTNL 175
           KL+ +  R     G+  ++P   V  L +G+QQ VEI + L +D  +LVLDEPTA+LT  
Sbjct: 120 KLNELAARQLAKIGMQNIDPATPVARLGIGQQQMVEIARNLQDDTRVLVLDEPTAMLTPR 179

Query: 176 EAERLFSTLKDMAREGLSLIFISHKLDEVMAAANRIVVLRGGRKVAERLAKETNKAELAE 235
           E   LF  ++ +   G++++++SH+L+E+   A+R+ VLR GR V  R      ++EL +
Sbjct: 180 ETSHLFEQIELLKARGVAIVYVSHRLEELQRIADRVAVLRDGRLVDVRAMAGVRESELVQ 239

Query: 236 LMVGRRV-ARPVREPSTPGEVVLKVADVSVSIDGVERLKSIDFSLRAGEVLGIIGVSGNG 294
            MVGR V     RE  T G V+L        I   + ++ +D  LRAGEV+G+ G+ G+G
Sbjct: 240 RMVGRAVHEHEGRERRTAGPVLLSAR----GIGRAQVVRDVDIDLRAGEVMGLAGLVGSG 295

Query: 295 QTTLAHLLSGTLRRDKGDLLLF--GEPI-----GDLTVDDAVRAGIGRIPEDRNKEGAIG 347
           +T L  LL G  R D+G++ L+   +P+     G  +   A+RAGIG + EDR  +G + 
Sbjct: 296 RTELVRLLFGADRADRGEITLYENDQPVQQARKGWRSPMQAIRAGIGLVTEDRKSQGLLL 355

Query: 348 EMAIWENAVLERLPRFSRYGLVDRPSGQAFAGQIIDAFDVRGGRPTTRTRLLSGGNMQKL 407
             +I  NA L  L   SR G + R   +  A ++++   +R          LSGGN QK+
Sbjct: 356 TQSIRVNATLSDLGAISRAGWLQRAKERGIAQKLVELLRIRSRSIEQPVATLSGGNQQKV 415

Query: 408 ILGRNLMDRPRILLAAQPARGLDEGAVAAVHERLLEARRAGTAVLLISEDLEEVMALADR 467
           +  R L    ++LL  +P RG+D GA A ++  L     AG A+L++S DL E+MA+ DR
Sbjct: 416 VFARWLHRECKVLLLDEPTRGVDVGARADLYAELDRMTDAGKALLMVSSDLRELMAMCDR 475

Query: 468 IQAIVNGRLSPPIAADSASATKLGLMMAGEWNEEHEVPHAF 508
           I  +  GRL             + +   GEW E+  +  AF
Sbjct: 476 IGVMSAGRL-------------VAVFERGEWTEQSLLAAAF 503