Pairwise Alignments

Query, 508 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 505 a.a., ribose ABC transporter ATP-binding protein RbsA from Dickeya dianthicola ME23

 Score =  286 bits (733), Expect = 9e-82
 Identities = 168/498 (33%), Positives = 279/498 (56%), Gaps = 8/498 (1%)

Query: 3   EAILNICSVSKRFGDNLANDDISLSLGKGEIVALLGENGAGKTTLMSILFGHYVPDSGKV 62
           + +L +  ++K F    A    +L++  G+++AL+GENGAGK+T+M +L G Y  D+G +
Sbjct: 2   QPLLQLQGITKTFPGVKALSGAALNVYPGKVMALVGENGAGKSTMMKVLTGIYRKDAGSI 61

Query: 63  LVEGRELPPGKPRAAIRAGIGMVHQHFSLAPNLTVLENVMAGTERLWHL-RSGTSAARRK 121
              G+++    P+A+  AGIG++HQ  +L P LT+ EN+  G E    L R        +
Sbjct: 62  HFLGKDVDFSGPKASQEAGIGIIHQELNLIPQLTIAENIFLGREFTNRLGRIDWKRMYAE 121

Query: 122 LHRICQRFGLTVEPDARVGDLSVGEQQRVEILKALYNDAHILVLDEPTAVLTNLEAERLF 181
             ++ +R  L  +    VG+LS+G+QQ VEI K L  ++ ++++DEPT  LT+ E   LF
Sbjct: 122 ADKLLKRLNLRYDSRRLVGELSIGDQQMVEIAKVLSFESQVIIMDEPTDALTDTETASLF 181

Query: 182 STLKDMAREGLSLIFISHKLDEVMAAANRIVVLRGGRKVAERLAKETNKAELAELMVGRR 241
             +K++  +G  +++ISH+L E+    + + V R G+ + ER   E  +  L E+MVGR+
Sbjct: 182 GVIKELQSQGCGIVYISHRLKEIFEICDDVTVFRDGQFIGERPVNELQEDSLIEMMVGRK 241

Query: 242 VARPV-REPSTPGEVVLKVADVSVSIDGVERLKSIDFSLRAGEVLGIIGVSGNGQTTLAH 300
           +     R    PGEV L+V+++S    GVE   ++ F+L  GE+LG+ G+ G G+T L  
Sbjct: 242 LEEQYPRLNQAPGEVRLQVSELSG--PGVE---NVSFTLCKGEILGVAGLMGAGRTELMK 296

Query: 301 LLSGTLRRDKGDLLLFGEPIGDLTVDDAVRAGIGRIPEDRNKEGAIGEMAIWENAVLERL 360
           +L G L R  G + L G+ +   +  D + +GI  I EDR  +G +  M++ EN  L  L
Sbjct: 297 VLYGALPRTHGKVHLDGKDVVTRSPQDGLASGIVYISEDRKHDGLVLGMSVKENMSLTAL 356

Query: 361 PRFSR-YGLVDRPSGQAFAGQIIDAFDVRGGRPTTRTRLLSGGNMQKLILGRNLMDRPRI 419
             FS   G +     Q      I  F++R    +    LLSGGN QK+ + R LM RPR+
Sbjct: 357 RYFSNAAGSLRHGDEQQAVSDFIRMFNIRTPSMSQPIGLLSGGNQQKVAIARGLMTRPRV 416

Query: 420 LLAAQPARGLDEGAVAAVHERLLEARRAGTAVLLISEDLEEVMALADRIQAIVNGRLSPP 479
           L+  +P RG+D GA   +++ + + ++ G +++L+S ++ EV+ ++DRI  +  GRLS  
Sbjct: 417 LILDEPTRGVDVGAKKEIYQLINQFKQEGLSIILVSSEMPEVLGMSDRIIVMHEGRLSGE 476

Query: 480 IAADSASATKLGLMMAGE 497
              + A+   L     G+
Sbjct: 477 FPIEQATQETLMAAAVGK 494



 Score = 98.6 bits (244), Expect = 5e-25
 Identities = 63/227 (27%), Positives = 118/227 (51%), Gaps = 7/227 (3%)

Query: 22  DDISLSLGKGEIVALLGENGAGKTTLMSILFGHYVPDSGKVLVEGRELPPGKPRAAIRAG 81
           +++S +L KGEI+ + G  GAG+T LM +L+G      GKV ++G+++    P+  + +G
Sbjct: 269 ENVSFTLCKGEILGVAGLMGAGRTELMKVLYGALPRTHGKVHLDGKDVVTRSPQDGLASG 328

Query: 82  IGMVHQ---HFSLAPNLTVLENVMAGTERLWHLRSGT---SAARRKLHRICQRFGL-TVE 134
           I  + +   H  L   ++V EN+     R +   +G+      ++ +    + F + T  
Sbjct: 329 IVYISEDRKHDGLVLGMSVKENMSLTALRYFSNAAGSLRHGDEQQAVSDFIRMFNIRTPS 388

Query: 135 PDARVGDLSVGEQQRVEILKALYNDAHILVLDEPTAVLTNLEAERLFSTLKDMAREGLSL 194
               +G LS G QQ+V I + L     +L+LDEPT  +     + ++  +    +EGLS+
Sbjct: 389 MSQPIGLLSGGNQQKVAIARGLMTRPRVLILDEPTRGVDVGAKKEIYQLINQFKQEGLSI 448

Query: 195 IFISHKLDEVMAAANRIVVLRGGRKVAERLAKETNKAELAELMVGRR 241
           I +S ++ EV+  ++RI+V+  GR   E   ++  +  L    VG++
Sbjct: 449 ILVSSEMPEVLGMSDRIIVMHEGRLSGEFPIEQATQETLMAAAVGKQ 495